KEGG   Paracoccus sp. AK26: FIU66_13590
Entry
FIU66_13590       CDS       T08451                                 
Name
(GenBank) ligase-associated DNA damage response DEXH box helicase
  KO
K03724  ATP-dependent helicase Lhr and Lhr-like helicase [EC:5.6.2.6 5.6.2.4]
Organism
paak  Paracoccus sp. AK26
Brite
KEGG Orthology (KO) [BR:paak00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:paak03400]
    FIU66_13590
Enzymes [BR:paak01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     FIU66_13590
    5.6.2.6  RNA 3'-5' helicase
     FIU66_13590
DNA repair and recombination proteins [BR:paak03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    FIU66_13590
SSDB
Motif
Pfam: DEAD_assoc WHD_Lhr DEAD Helicase_C Cas3-like_C_2 ResIII
Other DBs
NCBI-ProteinID: QIR86157
LinkDB
Position
complement(2733555..2735927)
AA seq 790 aa
MTLPPEFQDWFAAQGWQPHPHQLDLLAAQGDTLLIAPTGGGKTLAGFLPSLVDLKDGHRG
LHTLYVSPLKALTADIARNLARPVAELNLPVRVEDRTGDTRSSQRARQRVDPPQILLTTP
ESLALMLSYEQAPQIFGSLRRVVLDELHALAENKRGDQLMLCLARLRSLAPGLTATGLSA
TVEDPRALADFMGGAAIIHADPGPEPDIAMLATARPAPWSGGGGHYAVPEVLAEIRQART
TIIFINTRAQAELFFQALWAANDDNLPIGLHHGSLAREARQRVEAAMAAGELRAVVATGS
LDLGIDWGAVDLVIQVGAPKNVKRLVQRIGRANHRYNAPSRARIVPANRFEVVECIAALE
AVHEHDLDGDPRGPGPLDVLCQHILLTACAGPFDADALLAEVRTAGPYRRLTRAQFDDCL
DFAATGGYALRAYDRWQRLMQRDGLWRLRDPRAARELRMNVGTIVEAEMLKVRFRRGGGL
LGEVEEGFAATLVPGDTFLIGGQTVRYDALREMVVEVTKQPTRQPRIALYSGMKLATSTQ
LSHRVQALIGDRSRHWVLPPDTADWLALQEKISTLPQPGVLLSESFPFQGKWHFALYGFA
GRNALQTLSLLMTKTMEDAGLGPLGFIATDYALLIWSLDAVTDPAPLLDREALRAGLGDW
LGGNAVMKRTFKNVAVISGLIQRNMPGQRKSGKQATFSSDILYDTLRRYDPDHLLLRITA
DEARRGLVDFDRIEEMLDHLPHHDHRMTGRVTPLAAPLLLEYGRVPITGAGRDRMAEAEA
QALMAEAGLA
NT seq 2373 nt   +upstreamnt  +downstreamnt
gtgacccttccgcccgaatttcaggactggttcgcagcccagggctggcagccccatccc
caccaactggaccttctggcggcccagggcgacacgctgctgatcgcgccgaccgggggc
ggcaagacgctggcaggcttcctgccctcgctggtcgacctgaaggatgggcacagaggg
ctgcacacgctctatgtctcacctctgaaggcgctgacggcggatatcgcgcgcaacctg
gcgcgcccggtggccgagctcaacctgcccgtccgggtcgaggatcggacaggcgacacg
cgatcctcgcaacgcgcgcgccaacgggtcgatccgccgcagatcctgctgaccacgccg
gaatcgctggccttgatgctgtcctatgagcaggcgccgcagatcttcggcagtttgcgc
cgcgtggtgctggacgaattgcacgcgcttgcggaaaacaagcgcggcgaccagttgatg
ctgtgcctggcgcggctgcggagcctggcccccggcctgaccgccaccggcctgtccgcc
acggtcgaggatccgcgcgccttggccgatttcatgggcggcgcggcgatcatccatgcc
gatcccggccctgaacccgacattgccatgctggcgaccgcccgccccgcgccttggtcc
ggcggaggcggtcattacgccgtccccgaggttctggccgagatcaggcaggcccgcacc
accatcatcttcatcaacacccgcgcccaggccgaactgttcttccaggccctgtgggcc
gccaatgacgacaacctgcccatcgggttgcaccacggcagccttgcacgcgaggcgcgg
caacgggtcgaggccgcgatggccgcaggggaactgcgcgccgtggtggcgacgggcagc
ctggatctgggcatcgactggggcgcggtcgatctggtgatccaggtcggcgcgcccaag
aacgtcaagcggctggtccagcggatcgggcgggcgaaccaccgttataacgcgccctcg
cgcgcgcggatcgtgcccgccaaccgcttcgaggtggtcgaatgcatcgccgcccttgaa
gccgtccacgagcatgatcttgacggcgatccgcgcggccctggccccttggacgtgctg
tgccagcatatcctgctgacggcctgcgcggggcccttcgatgccgacgcgctgctggcc
gaggtacgcaccgccggaccttatcgcaggctgacccgggcgcaattcgacgactgcctg
gatttcgcggcaaccgggggatacgcgctgcgggcctatgaccgctggcagcgtctgatg
cagcgcgacgggctgtggcgtctgcgcgatccgcgcgcggcccgcgagttgcgcatgaac
gtgggcaccatcgtcgaggccgagatgctgaaggtccggttccggcgcggcggcggcctg
ttgggcgaggtcgaggaaggctttgccgcgaccctggtgcccggcgacaccttcctgatc
ggcgggcagaccgtcaggtacgacgccctgcgcgagatggtggtcgaggtgacgaagcag
ccgacccggcaaccacggatcgcgctgtattctgggatgaagctggcgacatcaacccaa
ctgtcgcaccgggtccaggcgctgatcggcgatcggtcgcgccattgggtgctgccgccg
gacaccgccgactggctggcgctgcaggaaaagatcagcacgctgccgcagcccggcgtg
ctgctgagcgaaagctttcccttccagggcaagtggcacttcgccctttatggcttcgcc
gggcgcaacgcgctgcagacgctgagcctgctgatgaccaagacgatggaggatgcgggc
cttggcccccttggcttcatcgcgaccgactatgcgctgctgatctggtcgttggatgca
gtgaccgatcccgcgcccttgctggatcgcgaagcgctgcgcgcgggcttgggcgactgg
ctggggggcaatgccgtgatgaagcggaccttcaagaacgtcgccgtgatctcgggcctg
atccagcggaacatgccgggacagcgcaagtcgggcaagcaggcgaccttttccagcgac
attctttacgataccttgcgccgctacgaccccgaccacctgctgctgcgcatcaccgcg
gacgaggcgcggcggggccttgtcgatttcgaccggatcgaggagatgctggaccatctg
ccccatcacgaccaccgcatgacgggccgcgtgacacccctggccgcgcccttgctgctg
gaatacggccgcgtgccgatcaccggcgcgggccgcgaccgcatggccgaggccgaggcc
caggcccttatggccgaggcggggctggcgtga

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