Paracoccus sp. AK26: FIU66_13880
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Entry
FIU66_13880 CDS
T08451
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
paak
Paracoccus sp. AK26
Pathway
paak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
paak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
FIU66_13880 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
paak03021
]
FIU66_13880 (rho)
03019 Messenger RNA biogenesis [BR:
paak03019
]
FIU66_13880 (rho)
Transcription machinery [BR:
paak03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
FIU66_13880 (rho)
Messenger RNA biogenesis [BR:
paak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
FIU66_13880 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
S1CSD-TOTE-2
AAA_22
NACHT
AAA_25
ATPase_2
Fungal_virus_P2_C
OB_RNB
AAA
Motif
Other DBs
NCBI-ProteinID:
QIR86207
LinkDB
All DBs
Position
complement(2786133..2787404)
Genome browser
AA seq
423 aa
AA seq
DB search
MSEERLNLSELKAKSPAELLSLAEEWEIENASTMRKGEMMFSILKEHAEEGFDIGGDGVL
EVVQDGFGFLRSTAANYLPGPDDIYVSPDMIRQHSLRTGDTVEGVIRAPGENERYFALTK
VERINFEDPEKARHKVAFDNLTPLYPNERLKMEIEDPTLKDRSARIIDLVAPIGKGQRSL
IVAPPRTGKTVLLQNIAHSIERNHPECYLIVLLIDERPEEVTDMQRSVKGEVVSSTFDEP
ASRHVAVSEMVIEKAKRLVEHKRDVVILLDSITRLGRAFNTVVPSSGKVLTGGVDANALQ
RPKRFFGAARNIEEGGSLTIIATALIDTGSRMDEVIFEEFKGTGNSEIVLDRKVADKRVF
PAMDILKSGTRKEELLVDSKDLQKTYLLRRILNPMGTTDAIEFLISKLKQTKSNSEFFDS
MNA
NT seq
1272 nt
NT seq
+upstream
nt +downstream
nt
atgtccgaagaacgcttgaacctgtccgaactcaaggccaagagcccggccgaacttctc
tccttggccgaagagtgggagatcgagaacgcctcgaccatgcgcaagggcgagatgatg
ttctcgatcctcaaggaacatgccgaggaagggttcgacatcggcggcgatggcgtgctc
gaggtggtccaggatggcttcggcttcctgcggtcgacggccgcgaactatctgcccggt
cccgacgacatctatgtcagccccgacatgatccgccagcacagcctgcgcaccggcgac
acggtcgaaggcgtgatccgcgcccctggcgagaacgagcgttacttcgcccttaccaag
gtcgagcgcatcaatttcgaggatcccgagaaggcccgccacaaggtggccttcgacaac
ctgacgccgctttatcccaatgagcggctgaagatggagatcgaggatccgacactaaag
gatcgctcggcccggatcatcgacctggttgcgccgatcggcaaggggcagcggtcgctg
atcgtggcgcccccgcggaccggcaagacggtgctgttgcagaacatcgcccattcgatc
gagcgcaaccatccggaatgttacctgatcgtgctgctgatcgacgaacgccccgaggag
gtgaccgatatgcagcgttcggtcaagggcgaggtcgtgtcgtcgaccttcgacgaaccg
gccagccggcatgtcgccgtgtccgagatggtgatcgagaaggccaagcgtctggttgaa
cataaacgagatgttgtgattcttctggattcgatcacaagacttggtagggccttcaac
accgtcgtgccgagttctggcaaggttctgaccggcggcgtcgatgcgaatgcgctgcag
cggccgaagcggttcttcggcgcggcgcggaacatcgaagaaggcggctcgctgaccatt
atcgcgactgcgctgatcgataccggctcgcggatggacgaggtgatcttcgaagagttc
aagggcactggcaacagcgagatcgtgctggaccgcaaggtcgccgacaagcgggtcttc
ccggccatggatatcctgaagtccggcacccgcaaggaagaactgctggtcgactccaag
gacttgcagaagacctatctgctgcggcggatcctgaacccgatgggcacgaccgatgcg
atcgagttcctgatctcgaaactgaagcagaccaagtcaaactcggaattcttcgactcg
atgaacgcctga
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