Pyrococcus abyssi: PAB0062
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Entry
PAB0062 CDS
T00024
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
pab
Pyrococcus abyssi
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pab03016
]
PAB0062
Enzymes [BR:
pab01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
PAB0062
Transfer RNA biogenesis [BR:
pab03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
PAB0062
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Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
AKAP7_NLS
2_5_RNA_ligase2
Tctex-1
RBFA
PG_binding_2
Motif
Other DBs
NCBI-ProteinID:
CAB49026
UniProt:
Q9V2H2
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All DBs
Position
92866..93420
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AA seq
184 aa
AA seq
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MRAFIAIDVSEEVRDSLIKAQEFIGTRDAKIKFVERENLHITLKFLGEIDEATAQEIKEI
LAEIAKRHKKHEVRVKGIGVFPNPNYIRVIWAGVENDEEIRKIAEEIDKALSKLGFKREE
KFIPHVTIGRVKFVKDKLGLAEKLRELSNEDFGTFRVEAIELKKSTLTPKGPIYETLARF
ELSD
NT seq
555 nt
NT seq
+upstream
nt +downstream
nt
atgagggcgttcatagctatagacgttagcgaagaagtcagggactctctcattaaagct
caagaatttataggaacaagggatgcaaagataaagttcgttgagagggaaaatctccac
ataaccctaaagttcctgggggagattgacgaggcgactgctcaagagataaaggagatt
ctagctgagatagccaagaggcataagaagcatgaagttagagtcaagggaatcggcgta
tttccgaatcccaactatataagggtgatttgggccggagtggagaacgacgaggagata
aggaagatagcagaggagatagataaagccctttcaaagctcggcttcaagagagaggaa
aaatttattccacacgttacaataggaagggtaaagttcgttaaagataagcttggtctg
gcggagaaactcagggaattatcaaacgaggacttcggaacgttcagggttgaagctata
gagctaaagaagagcaccttaactccaaaggggccaatttatgaaaccctcgcaaggttt
gagcttagcgactag
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