Pyrococcus abyssi: PAB0067
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Entry
PAB0067 CDS
T00024
Name
(GenBank) DNA replication helicase, dna2 homolog
Organism
pab
Pyrococcus abyssi
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_12
AAA_11
AAA_30
AAA_19
PDDEXK_1
DEAD
NAT10_TcmA_helicase
Viral_helicase1
UvrD_C_2
Cas_Cas4
PhoH
IstB_IS21
SLFN-g3_helicase
Motif
Other DBs
NCBI-ProteinID:
CAB49033
UniProt:
Q9V2G5
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Position
99140..103066
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AA seq
1308 aa
AA seq
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MEFLTIELHPSEVARFFELEECPRFLILLERRKKGELREFMHIIRRKEEENKALTKWGNE
FELEILQELSKKFDFPFYGFFKLEEDKTAKRFIQKYYPGNAIEFKDFEGAYEMFRELLNL
DRVLIYQAPLAGKIGKFQLKGFSDFIIKDGNTYYILEAKFTKEEKLPHRLQAVMYAMLLR
KIVEGNIKLAVITKERFPWPNEFLSFPDDVLEFVDTIEEKLNLEIKWSEPWITARCTTCQ
FEPLCLSEALEKRSLGLLGIGPADKKVFEEVGIRRIEDLAKLIEFPSNSPTDFSELRINN
QNALTEISRRTGLNVPRLVRIAQAVTQERRGIVERMYIPRTGYNLPYDDGKLVKVFLYVQ
NSPITDTLIGISALIKSRVGERLVTEIVDEPPLDIEKGLIEEREMLERFFKDVIQAIKDL
SPTDEVYPHLYFYTRGQREALVDAVRRHRELWWSKPIRALLSLRRAIDWEGFSIIKDELI
ERHALPFAQGLGIIPVSIQFGYRWKDNESFREILEVLARKDGDALDLRRLYSVTDVDPLS
GEYYPALNRDDDEIPFTPFWRALVDERRKDLKNILSQVVKAIAKIEESIPERYKEYVEKP
GIPRGELETFDIEDGSLAKVLREYLLLEFHTRKGQLEKYYRLPEEIRAYSEKSAIVRIER
IERRVNGDCVIRGKIVLPSENGFKEYSPEEVLVDIDEDSWVCVTPLGAFSNGDPAKIIKR
SPLGVVEYLNHENGSIAIKFVRIPPGRFTFGHSTVECRNGRVKISDRKLYIGDYVILDPA
IDDIGMSRSYEVLENIDDEEHEIYEFLKNIYEGNINVNPKVKLWKKEHIEEFLSLLDHLN
EDQRKFVLDIDHRIVTLQGPPGTGKTSGAIAPAVLARAYSTIKQGKSALFIVTALSHRAV
NEALIRTYRLKEELKNIKELKNVELIRGVSGEEAIEPMKRELGGIKVDIRARFTFSKSTL
FPTVKILFATPQTVFKLVKNYEADLVVIDEASMMDLPMFLLATKNAKGQVLLVGDHRQMQ
PIQVHEWELEDRKTIEEHLPFLSALNFIRFLRGELEERELKRFKRILGRNPPKWKVDKED
VLPMHRLRETFRLPQALAELHSELFYSFDGIKLRSRKEPSEEIARALRNAGKNEFLRFIL
DPDYPVVLIVHDENGSSKVNELEAGIVKEIVEALNGVDVGVVVPYRAQKRLIRSLVNVQV
DTVERFQGGERDIIIVSMTSSDPSYLLKVMDFLYDPNRLNVAGSRAREKLILIASRNLFT
LSARDLDTFEILRPWKRFYIKMKREGEARKFEREGYNIVAFRWYHRKA
NT seq
3927 nt
NT seq
+upstream
nt +downstream
nt
gtggagttcttgacgatagagcttcatccaagcgaggttgctaggttcttcgagctggag
gagtgccccagatttctaattcttttagaaaggagaaagaaaggcgaactaagggagttc
atgcatataatccggagaaaggaagaggaaaacaaggctttaactaagtggggaaatgag
ttcgagcttgaaatacttcaagagctctcgaaaaagtttgacttcccattttatgggttc
tttaaacttgaggaagataaaacagcaaagaggtttatccagaagtactaccctgggaat
gccatcgaattcaaggatttcgagggagcttatgaaatgttcagggaactgctgaatctt
gatagagtgttgatataccaagccccacttgcgggcaaaatagggaagttccagcttaag
gggttctcagattttatcatcaaggatgggaacacctactacatcttagaggccaagttc
acgaaggaggaaaagcttccacacaggctccaagccgtaatgtacgctatgctactgaga
aaaatagtggagggaaacataaagctcgcagttataactaaggaaaggtttccgtggcca
aatgaattcctaagctttcccgatgatgtcctcgaattcgtggataccatcgaagagaag
ttaaacttggagataaaatggagcgagccctggataacggctagatgtacgacttgccaa
tttgaacctctgtgcctctcggaagctttagagaagagaagcctcgggctcctgggaata
gggccagcggacaaaaaggttttcgaggaagtaggaataagaaggatagaagacctagct
aagctcatagagtttccaagcaacagtccaacggatttctcggagcttagaataaacaat
cagaatgccttaacagagataagcaggaggacaggtttgaacgttccacggctcgtcaga
atagcccaggccgttacgcaggaaagaagaggaatagttgagaggatgtacattcccagg
actggctacaatttgccttacgatgatgggaaactagttaaggtattcctgtacgttcag
aacagcccaataacggacactctgatagggatatcggcgttgattaagtcaagggtaggc
gagaggctggtaacagaaatcgttgatgagcctcctcttgatattgaaaaaggcctgatt
gaagagagagaaatgcttgaaaggttctttaaagatgtcatccaagccattaaagacctc
tccccaactgacgaggtttacccacacctatacttctacacgaggggccaaagggaagct
ctagtcgatgccgttagaaggcacagggaactatggtggagcaaacccataagagccttg
ttaagtttaaggagagcaattgactgggagggtttctcaataatcaaggacgagctgata
gaaaggcatgccctaccctttgctcagggtttgggaattatacctgtatcaatacagttc
ggatacaggtggaaagacaacgaatcgttcagggagatattggaggtgctagctaggaag
gatggagacgctttggatttaagaaggctatatagcgtaactgacgtagatcctcttagt
ggggagtattacccagcactaaatagggatgatgatgagatacccttcacgccattctgg
agggccctagttgatgaaagaaggaaagacctaaagaacattctctcccaagttgttaag
gcaattgcaaagatagaggaaagcattccagagaggtacaaagagtatgtagaaaaaccg
gggattcctaggggagaacttgagacgtttgacattgaagatggaagtttagcgaaggtg
ctccgagagtacttgctcttagagtttcatacaaggaaaggccagcttgaaaagtactac
cgcctacccgaggagattagagcttactctgagaagtcagccatagtgagaattgagagg
atcgaaagaagggtcaacggagattgcgtaattaggggaaaaattgttctgccaagtgaa
aatggattcaaggaatattccccggaagaagtcctagtcgatatagatgaagactcctgg
gtatgtgtaactcccctgggtgcattctctaatggagatccagccaagataataaaacgc
tcaccccttggagttgttgagtacctaaaccatgaaaacggttccatagcaataaagttt
gtaaggattcccccaggaagattcacttttggacactcaaccgtggaatgtagaaacggg
agagtcaaaatttcagacagaaagttgtacattggagattacgtcatcttggatccagcc
atagacgatatagggatgtccagaagttacgaggttttagagaacatagacgacgaagaa
cacgagatctacgagttcctaaagaacatatacgaggggaatatcaacgtcaatccaaaa
gttaaactctggaaaaaggagcacatagaagagtttctaagtctccttgaccatctaaac
gaggatcagagaaaatttgtccttgatatagaccacagaatagtaaccctccaaggaccc
ccaggaactggaaaaacctcgggagccatagccccagcagttctcgctagggcttattca
actataaagcaaggaaagagtgccctattcatagtaactgcactctcccacagggcagtt
aacgaagccctaatcaggacatatagactcaaagaggaattaaagaacattaaagagctg
aaaaatgtggagctgataaggggagtttccggggaggaagctatcgaaccaatgaaaaga
gagttagggggaataaaagtcgatataagggcacgctttacattttcaaagagcacactt
ttcccaactgtaaagattctcttcgcgacgcctcaaacggtgtttaaactcgttaaaaat
tacgaagcagacctagtggtgatagatgaagcgagcatgatggatttaccaatgttctta
ctggcaacgaagaatgctaagggccaggttctgctcgttggagaccataggcagatgcaa
ccgatccaggttcacgagtgggagcttgaggataggaaaacaattgaagagcacttaccc
ttcctttccgccttaaacttcataaggttcctcagaggggagctagaggagagggaactt
aagaggttcaagagaatcctgggaaggaatccgcctaaatggaaagttgataaagaggat
gttctgccaatgcacaggctcagggaaaccttcaggctcccccaagccttagctgagtta
cactcggaattgttctactccttcgatggaataaagctaaggagcaggaaagaacctagt
gaggaaatagcaagagccctaagaaatgcgggtaaaaacgaattcctaaggttcatcctg
gatccagattatcccgtggttttgatagttcacgatgagaacggttcaagtaaggtaaac
gaactcgaagcgggaatagtgaaggagatagtggaagccttgaacggagtggacgttgga
gttgtcgttccctatagggcacagaagaggctcataaggagcttagttaacgttcaagtt
gacaccgtagagaggttccagggaggtgaaagggacatcataatagtctcaatgacgtcg
agtgatccatcctacttattgaaggtcatggacttcctttacgatccaaacaggctgaac
gtcgctggaagcagagcgagggagaagctaatcctaatagcctcgaggaacttgttcacc
ctctcggctagagacttagacacgttcgaaatcctaaggccctggaagagattctacata
aagatgaaaagggaaggcgaggcaaggaaattcgaaagggagggatataatatcgttgca
tttagatggtaccatagaaaggcttaa
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