Pyrococcus abyssi: PAB0069
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Entry
PAB0069 CDS
T00024
Symbol
rfcL
Name
(GenBank) rfcL activator 1, replication factor C, large subunit
KO
K04800
replication factor C large subunit
Organism
pab
Pyrococcus abyssi
Pathway
pab03030
DNA replication
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
PAB0069 (rfcL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pab03032
]
PAB0069 (rfcL)
DNA replication proteins [BR:
pab03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (archaeal)
RFC (replication factor C)
PAB0069 (rfcL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA
Rad17
AAA_14
RCF1-5-like_lid
AAA_22
AAA_5
AAA_11
RuvB_N
nSTAND3
AAA_16
Zeta_toxin
DUF815
AAA_24
AAA_28
AAA_17
AAA_33
AAA_19
ABC_tran
ResIII
AAA_30
AAA_6
AAA_7
AAA_25
AAA_18
PPV_E1_C
Viral_helicase1
AAA_assoc_2
NPHP3_N
Gp44_lid
DNAX_ATPase_lid
T2SSE
TsaE
SRP54
HrcA_DNA-bdg
AAA_29
RNA_helicase
Ploopntkinase3
Hydin_ADK
Presenilin
Motif
Other DBs
NCBI-ProteinID:
CAB49035
UniProt:
Q9V2G3
LinkDB
All DBs
Position
107419..108858
Genome browser
AA seq
479 aa
AA seq
DB search
MPEVPWVEKYRPRRLSEIINQEDAISKVKAWIEAWLHGNPPKKKALLLAGPPGSGKTTTV
YALAREYNFEVIELNASDERTYDKIARYVQAAYTMDILGKRRKIIFLDEADNIEPSGAPE
IAKLIDRARNPIIMAANHYWEVPKEIRDRAELVEYKRLTQRDVINALVRILKREGITVPK
EVLVEIAKRASGDLRAAINDLQTVVAGGYEDARYVLAYRDVEKTVFQALGLVFASDNAKR
AKLAMMNLDMSPDEFLLWIDENIPHMYLKPEEMARAYEAISKADIYLGRAQRTGNYSLWR
YAIDMMTAGVAVAGTKKRGFAKFYPPNTLKMLAESKEERSTRNSIIKKIMSEMHMSKLEA
IETMKIIKTIFEKNLDLAAHFTVFLGLSEKEVEFLAGRENAGTIWGKALAIRRKLKKEEE
KIRKERKEEEKVEVREEKPEEKVEEKREERETKKEKEKKEEKKAEKKGKQVTLFDFIKK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgccagaagttccctgggtggagaagtatcgtcccaggaggcttagcgagataataaat
caggaggatgccataagcaaggttaaggcctggattgaggcatggcttcacgggaacccg
cctaagaaaaaggccttattacttgcaggtcccccaggaagcgggaagaccacgacagtc
tacgctttagcaagggagtataacttcgaagttatagagctcaacgccagcgatgagagg
acatatgataaaatagctaggtacgttcaggccgcttataccatggatatcctgggaaag
agaaggaaaattatcttcctggatgaagcggacaatatagagccaagtggggccccagag
attgccaagcttatagatagagcaaggaacccaataataatggctgccaaccattactgg
gaggtccccaaggagataagggacagagcagagctcgtggagtacaagaggcttacgcag
agagacgtcataaatgccctcgtgagaatactcaaaagggaagggataacggttccaaag
gaagttctagttgagatagccaaaagggccagtggagaccttagagccgccataaatgac
cttcaaaccgtagttgccgggggatacgaagatgcaaggtacgttttagcttacagagat
gttgaaaagaccgtgttccaagccctaggcctggtcttcgcaagcgacaatgccaaaagg
gcgaagctcgcgatgatgaaccttgacatgtccccggatgagttccttctttggatagac
gagaacattccacacatgtaccttaagcccgaggagatggccagggcttatgaagctata
agcaaggcggacatataccttgggagggcccaaagaaccgggaactattcattgtggagg
tacgccatagacatgatgacggctggagttgcagttgcaggaactaagaagaggggcttc
gcaaagttctaccccccgaacacgctgaagatgcttgctgagagcaaagaggagaggtcg
actaggaattcgataatcaagaagataatgagcgagatgcacatgagtaagctcgaggca
atagagactatgaagataatcaagacgatcttcgagaagaaccttgacttggcggctcat
tttactgtcttcctgggccttagcgagaaggaagttgaatttctagcggggagagaaaac
gctggaacgatatgggggaaggcgttagcgataaggaggaaacttaagaaggaagaggag
aaaatcagaaaagagaggaaagaggaggaaaaggtcgaggttcgggaggagaaacctgag
gaaaaagttgaagagaaaagggaagaaagggagaccaaaaaggaaaaggagaagaaggaa
gagaaaaaagctgagaagaaaggtaaacaggttacgctcttcgacttcataaagaagtag
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