Pyrococcus abyssi: PAB0071
Help
Entry
PAB0071 CDS
T00024
Name
(GenBank) Ribonuclease E homolog, putative
KO
K22469
ribonuclease FAU-1 [EC:3.1.26.-]
Organism
pab
Pyrococcus abyssi
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pab03009
]
PAB0071
Ribosome biogenesis [BR:
pab03009
]
Prokaryotic type
rRNA processing factors
PAB0071
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF402
RNase_E_G
S1
Motif
Other DBs
NCBI-ProteinID:
CAB49039
UniProt:
Q9V2F9
LinkDB
All DBs
Position
111534..112979
Genome browser
AA seq
481 aa
AA seq
DB search
MALWKGKNEVVEVSTESEISVRIRGIYSTALTKLFLDKGFKIVQPSDVIAERLGIEKSYE
DFDVDIYDRNHGITIVGTKVEEVRKALEEELVDVFFRKLPYKLYGVYKGIVVKRDDRYVY
VDIGNAIGTVLVEELPDAVEGDEVVVQVKKHNVLPHLSIMITIPGDYAVLIPKPIGVQRH
VKISRKIRDPEERERLRILGLSVNLGEWGILWRTAAAYKEWSLLRDELVRLSKIADKLKE
ADKYSAPAEIIEGRSIYEVEFGGGAKKKLDEIRNRVVPTIEGHHQYKSYDPEFTLAVEVA
EGILAKMPSQRQKISEGFVEAITNSKGPRVGWIFTLNHVKPDGQVIKIGPGEVIEVSSRP
LRVKIRRNLRPGRVYDGLEVPIEPGDYAITEIEAGKWWFVHRYYDRNGNLKGEFYNINTP
VEIYPDKARYVDLEVDIVKWPDGKKEIIDKEKLKEHYEDGIISEKLYKAVLRIVQEVYER
V
NT seq
1446 nt
NT seq
+upstream
nt +downstream
nt
ttggcgttgtggaaaggaaagaacgaggtggtggaagtgtctacagagtcagagatatcg
gtgaggattagggggatttatagcacggccctaacaaagctcttcctcgacaaggggttc
aagatcgtccaaccaagtgacgtcattgcagagaggctcgggattgagaagtcctacgag
gacttcgacgtcgacatatacgacagaaaccacggaataacgattgtgggaaccaaggtt
gaagaagttaggaaggcccttgaggaggaattagttgatgtattctttaggaagcttccc
tacaaattgtatggcgtctacaagggaatcgtcgtgaagagagacgacagatacgtgtac
gtggacattggaaatgcaataggaacagttctagtggaagagttgccagatgccgttgaa
ggggatgaggttgtcgttcaggtgaagaagcacaacgttctaccgcaccttagcatcatg
ataacgattcctggggactatgcagtgttaatacctaagccgataggggttcaaaggcac
gtgaagatatcgagaaagattagggatccagaggagagggagaggttaaggatacttggg
cttagcgtaaaccttggagaatggggaatcctatggaggactgcggccgcttataaggaa
tggagcctcctaagggatgagcttgtaaggttatctaagatagctgataagctaaaggaa
gccgacaaatactcagcacctgctgagataattgagggcagaagcatttatgaggtagaa
tttggaggaggggcgaagaagaagcttgacgagataaggaacagagtcgttccgacaata
gaggggcaccaccagtacaagtcctacgacccagaattcacgttagcagttgaggtcgct
gaggggattctagcgaagatgccctcccagaggcagaagataagcgaggggttcgttgag
gccataacaaattcaaagggcccaagggttggatggatattcacgctaaaccacgttaag
ccggatggtcaggttataaagatagggccaggggaagtaatagaggtatcttcaaggcct
ctaagggtcaagataaggaggaacttaagacctggaagggtctacgatgggcttgaggta
cctatagaaccgggagactacgcaataacggaaatagaggccggaaagtggtggttcgtt
caccgctactacgataggaacggaaacctcaagggagaattctataatataaatactcca
gtagagatatacccggacaaggctaggtacgtggatctcgaagtggacattgtgaagtgg
ccagatgggaagaaagagataatagacaaggaaaagctcaaggaacactacgaggatgga
ataataagtgagaagttgtacaaggccgttttgagaatagttcaggaagtttatgagagg
gtctag
DBGET
integrated database retrieval system
