Pyrococcus abyssi: PAB0095
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Entry
PAB0095 CDS
T00024
Symbol
dppF-1
Name
(GenBank) dppF-1 dipeptide ABC transporter, dipeptide-binding protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
pab
Pyrococcus abyssi
Pathway
pab02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PAB0095 (dppF-1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pab02000
]
PAB0095 (dppF-1)
Transporters [BR:
pab02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PAB0095 (dppF-1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
PRK
DUF5906
DUF2457
AAA_29
Motif
Other DBs
NCBI-ProteinID:
CAB49070
UniProt:
Q9V2C8
LinkDB
All DBs
Position
146838..147875
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AA seq
345 aa
AA seq
DB search
MKMKDFIVTENLKKYFPVRGGLFKQKNLYVHAVDGISINIRKGETFGLAGESGCGKSTFG
RLLLRLIEPTEGSIYFDGIDITKLDKDEMRKLRRRMGIVFQDPKSSLNPRMTIYDTLKRP
LEIHRLAESEEEKYDKIVEILEAVGLGEEHLSRYPHELSGGQLQRVSIARAIITNPDFVV
LDEPTSALDISVQAQILNLLVNLQRKFNLTYLFISHDISVLQYMSDRIGIMYLGKVVEIL
SIDDFRKGEIYHPYTAYLLLSTPALHPSKRTSRKVILTGEVPSPINVPPGCRFHVRCPFV
TQKCKDEEPPLVEIKKDHYVACHYPDKTREELGPLVREKLKMYSL
NT seq
1038 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatgaaggacttcatcgtaaccgaaaacttgaaaaaatatttcccagtacgaggg
ggacttttcaaacaaaagaacctttacgttcatgccgttgatggtataagcataaacata
agaaagggggaaacatttggactagcaggagagagcggttgtgggaagagcacctttgga
aggttactcctcagattgatagaaccaactgaggggagcatatattttgatggaatagac
ataacgaagctggataaggatgaaatgcgtaaacttagaaggagaatgggcatcgtcttc
caggatccaaagtcatctttgaatcctagaatgacgatttacgatacccttaagaggcca
cttgaaatccatagattggctgaaagtgaagaagaaaaatatgataaaatagtggagata
cttgaggccgttggacttggagaggagcatctaagtaggtatccgcatgagctaagtgga
gggcagttacagagggttagtatagcaagggccataataacaaacccagatttcgttgta
ttggatgagccgacatcagctctggatatctcggttcaggcccagatactaaatctcctg
gtaaaccttcagaggaaatttaatctaacgtacctcttcatttctcacgacatctcagtt
ctccagtatatgagtgataggatagggataatgtacctaggaaaggtagtcgaaatactc
agcatagatgattttaggaaaggggagatataccacccatatacagcctatcttcttctc
tcaactccagcgttgcatccaagtaaaaggacatctaggaaagtcatcttaacaggggaa
gttccaagcccgataaatgttcctcctggatgtagattccatgttaggtgcccatttgtt
actcaaaaatgcaaggacgaagaacctccgcttgtggagataaaaaaagatcactatgtt
gcgtgtcactatccagataagacgagagaagagcttggtcctcttgttagggagaaactt
aaaatgtattcactttaa
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