Pyrococcus abyssi: PAB0122
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Entry
PAB0122 CDS
T00024
Symbol
apu
Name
(GenBank) apu amylopullulanase
Organism
pab
Pyrococcus abyssi
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Glucodextran_C
Glyco_hydro_57
Motif
Other DBs
NCBI-ProteinID:
CAB49104
UniProt:
Q9V294
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Position
180434..184522
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AA seq
1362 aa
AA seq
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MRGKFRALFVLVIFVISVLGPGIKSVNAAEPKPLNVIIVWHQHQPYYYDPILGVYTRPWV
RLHAANNYWKMAHYLSKYPDVHVTIDLSGSLIAQIADYMRGKKDIHQIITEKIAKGEPLT
VEEKWFMLQAPGGFFDHTIPWNGEPVADKNGNPYRRFWRRYTQLKDKMLDAKNKYSNLPL
EEQKIAVTSEFTEQDYIDLAVLFNLAWIDYDYIMNTPELKALYDKVDTGGYTRKDVETVL
KHQMWLLNHTFEEHEKINLLLGNGNVEVTVVPYTHPIGPILNDFGWYEDFDAQVKKANEL
YKEYLGAGKVTPKGGWAAESALNDKTLEILAENGWKWVMTDQLVLEKLGVPKTIESYYKP
WVAQFGDKKIYLFPRNHDLSDRVGFRYAGMNQYDAVKNFVEELLKIQKQNYDGSLVYVIT
LDGENPWEHYPFDGKLFLEELYRQLEELQKKGLIRTVTPSEYIEMFGDKANKLTPKMMKR
LDFTTEDNVNALLKAKTLGELYDMVGVTEEMQWPESSWIDGTLSTWIGEPQENIAWYWLY
LARKALFENKDNVKDWNKAYEYLFRAEGSDWFWWYGRDQNSMQDYVFDRYFKLYLYEIYK
LAGLEPPSYLFGNYYPDGEPYIVRALVGLPEGVKKNWSSLSPLAKGIEVYFDDEGLHFVV
LTNRSFEISIYEPEKIIGNTFTVLQKKPEEFRYSEVPFSKDSVGLLITTHITVKGERGEV
FKATSYDNYKKVGEVKVNAINGGYEVVVPFDYIETPSDFYFAVSTINDNGSLEIITTPIH
LKLPKEIEGTLITEIKDIEGDDHGPGNYTYATDKVFVEHHLDLLKVRLLERPNSYVFEFY
FKELGDNPWNAPYGFSLQIMEVYLDYKEGGNTSAIKMFPDGPGSNVDLDPEHPWDVALRI
AGWDYGNIIVLANGTTYQGEMKISADPVKNRIIVEVPKKYLPKVPEFMAVLVGSQDGFGP
DKWRPVSVKAEQWVGGGAPADAVIAGVAPRVYDLLVPEGFEPTQEEQLSSFDPKAGKRAV
VKMIPVKAKTNVIVDMKDIEGDDHGPGTYTYATDKVFVEHHLDLLRFRMLDTGDTYTLEF
YFKELGDNPWNAPYGFSLQIIEVYLDFKEGGNTSAIKMFPDGPGSNVDLDPEHPWDVALR
IAGWDYGNIIVPANGTVYTGEMKISADPIKNAIIVEVPKKFISLDKNYGLYGAVLVGSQD
GFGPDKWRPVSVKAEQWVGGGASAEAVIAGVAPRVYDLLVPQGFRPTQEEQLSSFDPKAG
KRAIVKMIPLWSVPKEEKPSQTGTTTTRTPTKTSTPTPEKTTPKTTKTKTETKESPSPSQ
TPPSAGAPPSGEERTTQKTGGICGPAFVLVIVAIVAIARKRF
NT seq
4089 nt
NT seq
+upstream
nt +downstream
nt
atgagggggaaatttagggctttgttcgttttagtaatatttgtaattagcgtactaggg
ccaggaattaaaagcgtaaacgcagcagaaccaaaaccattaaatgtgataatcgtttgg
catcagcaccaaccgtactattatgacccaattttaggcgtttacacgagaccttgggtt
agacttcatgcggcaaataattactggaagatggcccactatctatcgaagtatccagat
gtccatgtcacaatagacctctctggctcattgatagcgcaaatagctgattatatgaga
ggaaagaaggacatacaccagataataactgagaagatagccaaaggagagccattaact
gttgaagaaaaatggttcatgcttcaggctcctggagggttctttgatcatacgataccg
tggaacggagaaccggtagccgataaaaacgggaacccctataggagattctggaggagg
tatacccagcttaaagacaagatgctcgatgcaaaaaacaagtattcaaatctacctctg
gaagaacagaaaattgccgttactagtgaatttactgaacaggactacattgacttggcg
gtactcttcaaccttgcttggatagattatgattacataatgaataccccggaactcaag
gctctatatgataaggttgataccggtggatacacgagaaaagacgttgaaactgtactt
aaacaccagatgtggttactaaatcacacgtttgaagagcatgaaaagatcaacttgcta
ctaggaaacggaaatgttgaggtgaccgtcgttccatatactcacccaatcgggccaatc
ctgaacgatttcgggtggtacgaagacttcgatgcccaagttaagaaggccaatgaatta
tataaagaatatctgggggcagggaaagttacaccaaaaggtggatgggcagctgagagt
gctctcaatgataagacattagagatacttgcagagaatggctggaaatgggttatgact
gatcagttggttctagagaagctaggagttcctaaaacaattgaaagttactataagccc
tgggttgctcagtttggggataagaagatttacctgttccccaggaatcatgaccttagc
gatcgtgtaggatttaggtatgccggaatgaatcaatatgatgccgtgaagaacttcgta
gaggaacttttgaagattcaaaagcagaattatgatggttctttagtctacgttataacc
ttggatggcgagaatccctgggagcactatccctttgatggtaaactcttcttggaggag
ctttataggcaattggaagagttacagaagaagggcctaataagaacggttactccgagc
gagtacatagagatgttcggggataaggcgaacaagctaactccaaagatgatgaagagg
cttgatttcacgacggaagataatgttaatgctttactaaaggcaaagacattgggcgaa
ctgtacgatatggttggagttaccgaggaaatgcagtggccggagtccagttggatagat
gggaccttatcaacttggatcggtgaaccccaggagaatatagcttggtactggctttat
ttggcaaggaaagctttattcgaaaataaagacaacgtgaaagattggaacaaggcttac
gaatacctctttagggcagagggaagcgattggttttggtggtatggaagggatcagaac
agtatgcaggattacgtctttgacaggtacttcaagttgtacctttatgagatctataaa
ttggctggactggaacctccgagctatttgtttggaaattactacccagatggtgagcct
tacatagttagagctcttgtggggctaccagaaggtgttaagaagaactggtccagcttg
tcaccactagcaaagggtatcgaggtatattttgatgacgagggattgcactttgtagtt
cttaccaataggagctttgagatcagtatttacgagcctgagaaaataattgggaatacc
ttcacagtgcttcagaagaaacctgaagaatttagatactctgaagttccattctccaag
gatagtgttggtctcctaataacgacccatataactgtaaaaggtgaaagaggagaggta
ttcaaggccactagctacgataactacaagaaagttggagaggttaaagtgaatgccatt
aatggcggttacgaagttgtagtgccattcgactacattgaaactccctcggacttttac
ttcgccgtgtcaacgataaacgacaatggaagccttgaaataataaccacaccaattcac
cttaagttgccaaaggagatcgaagggacgctgataactgaaattaaggacatagaaggt
gacgatcacgggcctggaaactacacctatgccacggacaaagtgttcgttgagcatcac
ctggacttgctgaaggttagactacttgagagaccaaattcttacgtctttgagttctat
ttcaaggagcttggtgataacccgtggaacgctccttacggattcagcctccaaataatg
gaagtgtatctcgattacaaggaaggcggcaatacctctgcaattaagatgttcccagat
gggcctggaagtaacgttgatttagacccagagcatccctgggacgttgctttaaggatt
gcaggatgggactatggaaatattatcgttctggctaatggaaccacatatcaaggagaa
atgaagatatctgcagaccccgttaaaaataggataatcgttgaggttccaaagaaatac
ttacctaaggttccggagttcatggcagtattagttggatctcaagacggttttggccct
gacaagtggaggcctgtttcagttaaggctgagcagtgggtcgggggaggcgctcctgca
gatgcagttatcgcgggagttgctccaagggtttatgatctcttggttcctgaagggttt
gagcctactcaggaggagcaacttagtagcttcgatccaaaggccggaaagagggcagta
gtgaaaatgattccagtgaaggcaaagacaaacgtaatcgttgatatgaaagatatcgaa
ggcgatgaccacgggcctggaacctacacttatgctacggacaaagtgttcgttgagcat
cacctagacctattgaggtttaggatgctagacacgggggatacttacaccttagagttt
tacttcaaggagcttggggacaatccatggaatgctccttacggattcagtcttcagata
atagaagtatacttggactttaaagagggaggtaatacttccgcgatcaagatgttccca
gatggaccaggcagtaacgttgacttagacccagaacatccctgggacgttgcattaaga
attgccggttgggactatggaaatatcatcgtcccagcgaacgggactgtgtacacggga
gaaatgaaaatatcggcggatcctattaagaacgcaataatcgttgaagttccgaagaaa
ttcataagccttgacaagaattatggcctttatggtgccgtattagttggatcccaggat
ggctttgggccagataaatggagacctgtttcagttaaggcggaacaatgggtaggagga
ggagcttctgctgaggcagtgatagctggcgtggctccaagggtttatgatcttttggtt
cctcaaggatttaggcctactcaggaggagcaacttagtagctttgatccaaaggccgga
aagagggcaatagtgaaaatgattcctctatggagcgtgcctaaggaggagaagccctca
caaactgggaccactacaacaagaacgcccacaaaaacgtcaactcccactccagaaaaa
acgaccccaaaaacaacgaagactaaaactgagaccaaagagtcaccatcaccatcccaa
acccctccatcagcaggagcacctccttcaggggaagaaagaacaacgcaaaagactggt
ggaatatgtggcccagcgtttgttctagtcatagtggccatcgtggcaattgccagaaaa
cgtttttag
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