Pyrococcus abyssi: PAB0320
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Entry
PAB0320 CDS
T00024
Symbol
srp54
Name
(GenBank) srp54 signal recognition particle, subunit SRP54
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
pab
Pyrococcus abyssi
Pathway
pab02024
Quorum sensing
pab03060
Protein export
pab03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
PAB0320 (srp54)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
PAB0320 (srp54)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PAB0320 (srp54)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
pab02044
]
PAB0320 (srp54)
Enzymes [BR:
pab01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
PAB0320 (srp54)
Secretion system [BR:
pab02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
PAB0320 (srp54)
Eukaryotic Sec-SRP protein
PAB0320 (srp54)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
AAA_22
Zeta_toxin
MobB
MeaB
nSTAND3
AAA_16
AAA_33
CbiA
AAA_17
cobW
LpxK
Glyco_transf_4
AAA_30
ATP_bind_1
ResIII
YqeC
NPHP3_N
AAA_18
KTI12
ParA
Fe-ADH
NTPase_1
APS_kinase
AAA_31
IMPDH
AAA
AAA_5
MMR_HSR1
Thymidylate_kin
NACHT
TsaE
AAA_7
AAA_19
6PF2K
NB-ARC
TrwB_AAD_bind
AAA_28
Rad17
AAA_26
YjeF_N
Motif
Other DBs
NCBI-ProteinID:
CAB49401
UniProt:
Q9V1E8
LinkDB
All DBs
Position
460197..461528
Genome browser
AA seq
443 aa
AA seq
DB search
MVLDSLGKALSNALKKIARAGSVDEALVKEVVRDIQRALIQADVNVRLVLKLTKEIQRRA
LEEKPPAGISKKEHIIKIVYEELTKFLGTEAKPIEIKEKPTILLMVGVQGSGKTTTVAKL
ARHFQKRGYKVGVVCSDTWRPGAYHQLKQLLDPYHIEVFGDPNEKDAIKLAKEGVEHFKA
KGVDLIIVDTAGRHKEEKDLIEEMRMISNEIKPHEVILVIDGTIGQQAYNQALAFKEATP
IGSIIVTKLDSSAKGGGALSAVAATGAPIKFIGTGEKIDDLEPFDPARFVSRLLGLGDIQ
GLLEKFKELEKEVEFTEEDLERFLKGKFTLKDMYAQLEAMRKMGPLKQILRMIPGLGYSL
PDEVISVGEERLRKFKVIMDSMTEEELMNPDIINYSRIKRIARGSGTSVKDVKELLNQYN
QMKKFFKSMNKRQLLRLARRFGM
NT seq
1332 nt
NT seq
+upstream
nt +downstream
nt
atggttctagattccctggggaaggcacttagcaatgccctcaagaagatagctagggcc
ggtagcgttgacgaggctttagttaaggaggttgttagggacattcagagggcgcttatt
caagctgatgtaaatgtgaggctagtcttgaagctaaccaaggagatacagaggagggcc
ttggaggagaaacctcccgccggaatctcgaagaaggaacacataataaagatagtgtac
gaggaactcacaaagttcctgggaaccgaggccaagcccatagagatcaaggagaagccc
acaattctgctgatggtaggcgttcagggtagcggtaagacaacgacggttgctaagcta
gctagacacttccagaagaggggttacaaggtgggcgtagtctgctcggacacttggaga
ccaggggcgtatcatcagttaaagcaattacttgatccctaccacatagaggtctttggc
gatccgaacgagaaggatgcgattaaactagctaaagaaggagttgaacacttcaaggcc
aagggagttgacttgataatagttgataccgccggaaggcacaaggaagagaaggatcta
atagaagagatgaggatgataagcaacgagatcaagccccacgaggttattctagtgata
gacggaactatagggcaacaagcttacaaccaagccttggcctttaaggaagcaacccca
ataggttcaataatagttaccaagctcgacagctcggccaagggaggaggggctttatct
gcagtagcagctactggagccccgataaagttcattggaacaggcgagaagatagatgat
ttagagccatttgacccagcgagattcgtttcaaggctactcggacttggcgacatccag
ggattgctcgagaagttcaaggagcttgagaaggaagtggaattcaccgaggaggatctg
gagaggtttcttaaagggaagttcacgcttaaagacatgtacgcccagctagaggccatg
aggaagatggggccactcaagcagatccttagaatgatcccaggattaggatactccctt
cccgacgaggtaatctcggtgggcgaagagaggctgaggaagttcaaagtcataatggat
tctatgacggaggaagagctcatgaacccagatataataaactactccaggataaagagg
atcgctaggggatccggaacctcggttaaagatgttaaggagttgttaaatcagtacaat
caaatgaagaagttcttcaagagcatgaataagaggcaactattaaggctcgcaaggagg
tttggaatgtga
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