Pyrococcus abyssi: PAB0425
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Entry
PAB0425 CDS
T00024
Symbol
rpoA2
Name
(GenBank) rpoA2 DNA-directed RNA polymerase, subunit A''
KO
K03042
DNA-directed RNA polymerase subunit A" [EC:
2.7.7.6
]
Organism
pab
Pyrococcus abyssi
Pathway
pab03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
PAB0425 (rpoA2)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pab03021
]
PAB0425 (rpoA2)
Enzymes [BR:
pab01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
PAB0425 (rpoA2)
Transcription machinery [BR:
pab03021
]
Prokaryotic type
Archaeal type
RNA polymerase
Core subunits
PAB0425 (rpoA2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb1_5
A_deaminase
DUF6511
DUF6076
GatB_Yqey
Motif
Other DBs
NCBI-ProteinID:
CAB49538
UniProt:
Q9V113
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All DBs
Position
585624..586817
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AA seq
397 aa
AA seq
DB search
MVSSSTIKSLIEKKGKDLPESVKQELYEKLIKYNEKYKLTKAEVETIIDEVVKEYERALV
EPGEAVGTVAAQSIGEPSTQMTLNTFHYAGVAEINVTLGLPRIIEIVDARKNPSTPMMTV
YLDEEHRYDREKAEEVARRIEGTTLENLARTTTLDLINMEFIVEIDPERLEKSGLTMEKV
LKKLQSSFKSAEFEMEGYTLIVRPKKFEKISDLRRLAEKVKKHRLKGLSGVGKTIVRKEG
DEYVIYTEGSNFKQVLKVPGVDPTRTKTNNIHEIAEVLGIEAARNAIIEEIMNTMREQGL
EVDIRHIMLVADIMTLDGVVRPIGRHGVVGEKASVLARAAFEITVQHLFEAAERGEVDNL
SGVIENVLIGQPVPVGTGMVKLTMKLPLRPQKEKEEV
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atggtttcttcctctacaattaaatctttgattgagaagaagggtaaggatcttcccgag
agcgtgaagcaggagctttatgaaaagctcatcaagtacaatgagaagtacaaactaacg
aaggccgaagttgagacgataatcgatgaggtcgttaaggagtacgaaagggctcttgtt
gagcctggagaagcagtcggaacggttgcggcccaatctataggggaaccctcaactcag
atgactctgaacactttccactatgctggtgtggctgagataaacgtaaccctaggtctt
cccaggattatagagatagtagatgcgaggaagaacccctcaacaccaatgatgaccgtt
tacttagatgaggaacatcgctatgatagggagaaggccgaggaagtggcgagaaggata
gagggtacaaccctcgaaaacttggcgagaacaacgactttggacttgattaatatggag
tttatagtcgaaattgatcctgagaggctcgagaagagtggcctaacaatggagaaagtc
cttaagaagttgcagagctctttcaagagtgctgagtttgaaatggagggttatacgcta
atagttaggcctaagaaattcgagaagatctccgaccttaggaggctcgccgaaaaggtt
aaaaagcaccgtcttaagggtctctcgggcgttggaaaaaccatcgtgagaaaggaaggc
gacgaatacgtcatatacaccgagggatctaacttcaagcaggtcctgaaggttcctggg
gttgatccaacgaggactaagaccaataacatccacgagatagctgaagtgttaggaatc
gaagctgcaaggaatgcaataattgaggaaattatgaacacaatgcgtgagcagggtctt
gaggttgatataaggcatataatgctcgtcgccgatatcatgacgcttgacggtgtagtg
aggccaattggaaggcacggtgtagttggtgaaaaggcaagtgtccttgcaagggcggcc
ttcgagattaccgtccaacacctgtttgaggccgccgagaggggagaggttgacaacctt
agcggagttattgaaaacgtcctcatagggcagcccgttccagtgggaacgggcatggtt
aagttgactatgaaactaccattgagaccccagaaagagaaggaggaggtgtag
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