Pyrococcus abyssi: PAB0465
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Entry
PAB0465 CDS
T00024
Symbol
tuf
Name
(GenBank) tuf translation elongation factor EF-1, subunit alpha
KO
K03231
elongation factor 1-alpha
Organism
pab
Pyrococcus abyssi
Pathway
pab03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
PAB0465 (tuf)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pab03019
]
PAB0465 (tuf)
03016 Transfer RNA biogenesis [BR:
pab03016
]
PAB0465 (tuf)
03012 Translation factors [BR:
pab03012
]
PAB0465 (tuf)
04131 Membrane trafficking [BR:
pab04131
]
PAB0465 (tuf)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
pab04147
]
PAB0465 (tuf)
Messenger RNA biogenesis [BR:
pab03019
]
Eukaryotic type
mRNA surveillance and transport factors
Factors involved in mRNA localization
Trans-acting binding proteins
PAB0465 (tuf)
Transfer RNA biogenesis [BR:
pab03016
]
Eukaryotic type
tRNA transport factors
tRNA export factors
PAB0465 (tuf)
Translation factors [BR:
pab03012
]
Eukaryotic type
Elongation factors
PAB0465 (tuf)
Membrane trafficking [BR:
pab04131
]
Autophagy
Chaperone mediated autophagy (CMA)
Other CMA associated proteins
PAB0465 (tuf)
Exosome [BR:
pab04147
]
Exosomal proteins
Proteins found in most exosomes
PAB0465 (tuf)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
GTP_EFTU
GTP-eEF1A_C
GTP_EFTU_D3
GTP_EFTU_D2
MMR_HSR1
RsgA_GTPase
FeoB_N
Gtr1_RagA
GTP_EFTU_D4
DUF7809
Motif
Other DBs
NCBI-ProteinID:
CAB49596
UniProt:
Q9V0V7
LinkDB
All DBs
Position
636920..638206
Genome browser
AA seq
428 aa
AA seq
DB search
MPKEKPHVNIVFIGHVDHGKSTTIGRLLYDTGNIPETIIKKFEEMGEKGKSFKFAWVMDR
LKEERERGITIDVAHTKFETPHRYITIIDAPGHRDFVKNMITGASQADAAVLVVAATDGV
MPQTKEHAFLARTLGIKHIIVTINKMDMVNYDQKVFEKVKAQVEKLLRTLGYKDFPVIPT
SAWNGDNIVKKSDKMPWYNGPTLIEALDQIPEPEKPVDKPLRIPIQDVYSIKGVGTVPVG
RVETGKLKVGDVVIFEPASTIFHKPIQGEVKSIEMHHEPLQEALPGDNIGFNVRGVSKND
IKRGDVAGHPDKPPTVVRTKDTFKAQIIVLNHPTAITVGYSPVLHAHTAQVPVRFEQLLA
KIDPRTGNITEENPQFIKTGDSAIVVLRPMKPVVLEPVKELPQLGRFAIRDMGMTIAAGM
VISIQKGE
NT seq
1287 nt
NT seq
+upstream
nt +downstream
nt
atgccaaaggagaagccccacgttaacatcgtgtttatcggacacgtagaccacggaaag
agcacgaccatcggaaggctcctctacgacaccgggaacatcccagagaccatcatcaag
aagttcgaggagatgggtgaaaagggtaagtccttcaagttcgcttgggtcatggacagg
cttaaggaggagagagaaaggggtatcaccatcgacgttgctcacaccaagttcgagacc
ccacacaggtacatcacgatcattgacgctccaggtcacagggacttcgttaagaacatg
atcaccggtgcaagccaggccgacgctgcagttctcgtcgttgcagctaccgatggtgtc
atgccacagaccaaggagcacgccttccttgcgaggaccctaggtatcaagcacatcata
gttaccataaacaagatggacatggtcaactacgaccagaaggtattcgagaaggtcaag
gcccaggttgagaagcttctcaggaccctcggttacaaggacttcccagtcattccaacg
agcgcttggaacggtgacaacatcgttaagaagagcgacaagatgccatggtacaacggc
ccaaccctcattgaggccctcgaccagatcccagagccagagaagccagttgacaagcca
ctaagaatcccaatccaggatgtgtactcaattaagggtgtcggtaccgttccagtcggt
agggttgagaccggtaagctcaaggtcggtgacgttgtgatctttgagccagcatcaacg
atcttccacaagccaatacagggtgaagtcaagagcattgagatgcaccacgagccacta
caagaggccctcccaggtgacaacataggattcaacgtcagaggtgtcagcaagaacgac
atcaagagaggtgacgttgctggtcacccagacaagccaccaacagtcgtaaggaccaag
gacacattcaaggcccagatcatcgtcctcaaccacccaactgcaattacggtcggttac
agcccagtcctacacgcccacactgcccaggttccagtcaggttcgagcagttactcgct
aagatcgacccaaggactggtaacatcaccgaggagaacccacagttcatcaagaccggt
gactcagctatcgtcgttctaaggccaatgaagccagtcgtccttgagcccgtcaaggag
cttccacagctcggtaggttcgctatcagagacatgggtatgaccatcgcagctggaatg
gttatctcaatccagaagggtgagtga
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