Pyrococcus abyssi: PAB0592
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Entry
PAB0592 CDS
T00024
Name
(GenBank) DNA helicase
KO
K03726
ATP-dependent DNA helicase [EC:
5.6.2.4
]
Organism
pab
Pyrococcus abyssi
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pab03400
]
PAB0592
Enzymes [BR:
pab01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
PAB0592
DNA repair and recombination proteins [BR:
pab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Archaeal homologous recombinant proteins
PAB0592
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_dom4_arc
DEAD
ResIII
Helicase_C
HHH_5
HHH_2
DEXQc_Suv3
DNA_pol_lambd_f
HHH
Cdd1
HTH_61
Hda_lid
Motif
Other DBs
NCBI-ProteinID:
CAB49795
UniProt:
Q9V0A9
LinkDB
All DBs
Position
847405..849552
Genome browser
AA seq
715 aa
AA seq
DB search
MKVGELNVSEKIKEILRERGIEELYPPQAEALTSGVLEGENLLVAIPTASGKTLIAEIAI
ANKLLEEGGKAVYIVPLKALAEEKFREFKDWERLGLKVAMATGDYDSKDEWLGKYDIIIA
TAEKFDSLLRHGSSWIRDVKMLVIDEIHLIGSRDRGATLEFIITQMLGRAQIIGLSATIG
NPEELAEWLNAKLIRSDWRPVKLRKGVFYQGFVFWEDGGSERYNSWEELVYDAVKKGKGA
LVFVNMRRKAEKTALELAKKVKNYLDRKELRELRELAESLEENPTNEKLAKALLSGVAFH
HAGLGRDERVLVEDNFRKGLIKVVVATPTLSAGINTPAFRVIIRDTWRYSEFGMERIPVL
EVQQMMGRAGRPRYDEVGEAIIVSTTEEPSLVIDHYIKGKPEKLFSQLSNESILRSQILA
LIATFGYSEFKEIYDFLERTFYAHQGKDPYMLEEKIRRIIYFLLENEFIEVTLEDEIKPL
PLGVRTTKLYIDPMTAKIFKDTLPRIEKNPNPLGIFHMISLAPDLTPLSYSKRETSMLED
EYYSLMDRLYFELDYENERKFFRAFKTALVLNAWINEVPEGEIVERFNVEPGDIYRIVET
AEWLIYSLGEIAKVLEASQEVVDYVNTLRLRVKHGIREELIPLMELPMVGRKRARALYNA
GFKDLESIRNAKPSELLRIEGIGAKIVEGIFKYLGKEVKITERPRKGTLDYFLNP
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgaaagttggagagctaaacgtcagcgagaaaataaaggaaatcctaagggagagggga
atcgaagagctttacccccctcaggcggaagccctaacctccggggttctagagggagag
aacttattggttgcaattccaaccgcaagcggaaaaacgctcatagctgagatagcaatt
gcaaataaattactggaagagggaggaaaggctgtctacatagttccccttaaggccttg
gccgaggaaaagttcagggaattcaaggactgggaaaggctgggccttaaagtggcgatg
gccacgggagattacgattccaaggacgagtggctcggcaagtacgacataataatagct
acagcggagaagtttgattccctacttaggcacggctcgagctggatcagggacgttaaa
atgcttgtaatcgatgagattcacttaatcggttctagggacaggggggcaacgctagaa
tttataataacgcaaatgcttgggagagctcaaataataggcttgtcggccactataggg
aacccggaagaattagctgagtggttgaacgctaagcttataaggagcgactggaggccc
gtaaagctaaggaagggagtgttttaccagggcttcgtattctgggaggatggaggaagc
gagaggtataactcctgggaagaactagtgtacgatgcagtaaagaaaggtaaaggagca
ctagttttcgtcaacatgagaagaaaggccgagaagacggctttagagttagccaagaag
gttaaaaattacctagacaggaaggagttaagggagctcagggagctcgcggaatcgcta
gaagaaaatcctacaaacgaaaagctagccaaggcattgttgagtggtgtagcctttcat
catgccggtttaggaagggacgagagggttttggttgaggacaacttcaggaagggccta
ataaaggtagtggttgcaaccccgacgctttcagccggaataaacactcctgcttttagg
gtaataataagggacacctggaggtactcggagttcggcatggagaggattccagttcta
gaggttcagcagatgatgggcagggccggaaggcctaggtacgatgaggttggagaggca
ataatagtctcaactaccgaggagccttcgctagttattgatcattacataaagggaaag
cccgaaaagttgttctctcagctctcaaacgagagcatactgaggagccaaatcttagct
ttgatagcaactttcggatactcagaattcaaggagatatacgattttttggagagaact
ttctatgctcatcaaggaaaagacccctacatgcttgaagagaagataaggaggataatc
tacttccttctagagaacgagttcatagaggtaacgctcgaagacgagataaagcctctc
ccccttggcgttagaacgacgaagctgtacatagacccgatgaccgctaagatattcaaa
gacacccttcccaggatagagaaaaatcccaaccccctgggaatattccacatgatatct
ctcgctccagatctgactcctctatcgtactctaagagggaaacctcaatgctggaagac
gagtactacagcttaatggacaggctgtacttcgagcttgactacgagaacgagagaaag
ttcttcagggcattcaaaacggccctagttttaaacgcttggataaacgaggtgcccgag
ggggagatagttgagaggttcaacgttgagcccggggatatatacaggatagtagagacc
gccgagtggttaatctactccctgggcgagatagcaaaagttttggaggcatctcaggaa
gtggtcgactacgtaaacaccttgaggctcagggtgaagcacggaatcagggaagaactg
atacccctaatggagttacccatggtcgggaggaaaagggcgagggcactttacaatgct
gggttcaaggatttggagagcataaggaacgctaagccttccgagcttctaaggatagaa
ggaataggggcaaaaatagttgaaggaatattcaaatatcttggcaaggaggttaagatt
acggagaggcccaggaagggaaccttggactatttcctgaacccataa
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