Pyrococcus abyssi: PAB0785
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Entry
PAB0785 CDS
T00024
Symbol
rfbB
Name
(GenBank) rfbB dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pab
Pyrococcus abyssi
Pathway
pab00521
Streptomycin biosynthesis
pab00523
Polyketide sugar unit biosynthesis
pab00525
Acarbose and validamycin biosynthesis
pab00541
Biosynthesis of various nucleotide sugars
pab01100
Metabolic pathways
pab01110
Biosynthesis of secondary metabolites
pab01250
Biosynthesis of nucleotide sugars
Module
pab_M00793
dTDP-L-Rha biosynthesis, Glc-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
PAB0785 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
PAB0785 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
PAB0785 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
PAB0785 (rfbB)
00525 Acarbose and validamycin biosynthesis
PAB0785 (rfbB)
Enzymes [BR:
pab01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
PAB0785 (rfbB)
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GFIT
Motif
Pfam:
GDP_Man_Dehyd
Epimerase
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
NAD_binding_10
NmrA
adh_short
Sacchrp_dh_NADP
KR
Statherin
Motif
Other DBs
NCBI-ProteinID:
CAB50087
UniProt:
Q9UZH2
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All DBs
Position
1133627..1134628
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AA seq
333 aa
AA seq
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MRILVTGGMGFIGSNFIRYILEKHNDWEVINLDKLTYGSNPANLKDIQDDPRYTFVKGDV
ADFELVRELIKKVDAIVHFAAESHVDRSISSPDNFLHSNVIGTYTLLEAIRKENPGVRLV
HISTDEVYGDILKGSFTEEDRLMPSSPYSATKAASDMLVLGWARTYGLNASITRCTNNYG
PYQFPEKLIPKTIIRAKMGLKVPIYGTGKNVRDWLYVEDHVRAIEAVLLKGEAREIYNIS
AGEERTNLEVVRTILRIMDKDESLIEFVEDRPGHDIRYSLDSWKIIRELKWRPKYRFEEG
IKKTVEWYLENEWWWKPLINERVLHPTPWKLEW
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgcgtattctagtaacaggtggtatgggattcatagggagcaacttcatacgttacatc
cttgaaaagcacaatgactgggaggtcataaacttagacaagctaacctacggttcaaat
ccggcaaacctaaaggatatccaagatgatccccgctatacgttcgttaagggtgatgtg
gcagattttgagcttgtgagagagctcatcaaaaaggttgatgcgatcgttcacttcgcg
gctgagagccacgttgataggagcatttcttctccagataattttcttcacagcaatgtc
atagggacttacactctcttggaggctatcagaaaagaaaatcctggggtaagattagtt
catataagtacagatgaggtttatggagatatactcaaaggctcatttaccgaagaggat
aggctcatgccttcctctccttactctgctactaaagcggctagtgatatgctagtctta
ggatgggcgagaacatatggtttgaatgcatccataacgcggtgcaccaacaactacggg
ccctaccaattccccgaaaagctcataccgaagacaatcataagggccaagatgggacta
aaggttcccatatacggaactggcaagaacgttagagattggctctatgtagaggatcac
gtgagggccattgaagctgttttgctgaaaggggaggcaagggagatttataacatctcg
gccggggaggaaagaacgaaccttgaggttgttaggacaatattaaggattatggacaag
gacgaatctctcatagagttcgtcgaggatagacccggtcacgacatccgttattcactc
gattcttggaaaatcattagagagctcaagtggagacctaagtataggttcgaagagggt
attaagaagaccgttgaatggtacctcgaaaacgagtggtggtggaagcccctaattaat
gagagggtactccacccaacgccctggaaattggagtggtaa
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