Pyrococcus abyssi: PAB0812
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Entry
PAB0812 CDS
T00024
Name
(GenBank) Rad50 purine ntpase
KO
K03546
DNA repair protein SbcC/Rad50
Organism
pab
Pyrococcus abyssi
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pab03400
]
PAB0812
DNA repair and recombination proteins [BR:
pab03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
PAB0812
Archaeal homologous recombinant proteins
PAB0812
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
Rad50_zn_hook
AAA_15
AAA_21
AAA_23
AAA_29
NPV_P10
Baculo_PEP_C
ATG17_like
EzrA
AAA_13
Crescentin
SbcC_Walker_B
AAA_27
HMBD
ABC_ATPase
Serine_rich
SOGA1-2-like_CC
OVT1
Exonuc_VII_L
DUF1664
Hydro_N_hd
DUF5679
RsgA_GTPase
AAA_16
Seryl_tRNA_N
FtsK_SpoIIIE
Tropomyosin
Motif
Other DBs
NCBI-ProteinID:
CAB50131
UniProt:
Q9UZC8
LinkDB
All DBs
Position
1176484..1179126
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AA seq
880 aa
AA seq
DB search
MKIEEVKVYNFRSHEETVVRFRKGINLIIGQNGSGKSSLLDAILVGLYWSKKLRLRGLKK
DEFRRIGGKGGTRIEIKFENDDSKYVLFRDFSRNVAYLKVQENGKWRHASEPSMESVSSY
IERILPYNVFLNAIYIRQGQIDAILESDETRDKVVREILNLDKLESAYENLKRIKTNINL
LIESKKSFIARTENIEELIKANEDELTKKLSEINEISSKLPPIRGELEKVRENVKELESI
KGKISELKIQVEKLKGRKKGLEEKIVQIERSIEEKKAKISELEEIVKDIPKLQEKEKEYR
KLKGFRDEYESKLRRLEKELSKWESELKAIEEVIKEGEKKKERAEEIREKLSEIEKRLEE
LKPYVEELEDAKQVQKQIERLKARLKGLSPGEVIEKLESLEKERTEIEEAIKEITTRIGQ
MEQEKNERMKAIEELRKAKGKCPVCGRELTEEHKKELMERYTLEIKKIEEELKRTTEEER
KLRVNLRKLEIKLREFSVMRDIAEQIKELESKLKGFNLEELEQKEREFEGLNEEFNKLKG
ELLGLERDLKRIKALEGRRKLIEEKVRKAKEELENLHRQLRELGFESVEELNLRIQELEE
FHDKYVEAKKSESELRELKNKLEKEKTELDQAFEMLADVENEIEEKEAKLKDLESKFNEE
EYEEKRERLVKLEREVSSLTARLEELKKSVEQIKATLRKLKEEKEEREKAKLEIKKLEKA
LSKVEDLRKKIKDYKTLAKEQALNRISEIASEIFSEFTDGKYSNVIVRAEENKTKLFVVY
EGKEVPLTFLSGGERIALGLAFRLALSMYLVGRIDLLILDEPTPFLDEERRRKLLDIMER
HLRRISQVIMVSHDEELKDAADYVIRLRLEGGKSKVEVVS
NT seq
2643 nt
NT seq
+upstream
nt +downstream
nt
atgaagatagaggaggttaaagtttacaatttcaggtcacacgaggaaactgtggttagg
tttagaaagggaattaacctaataataggccaaaacggttccggaaagagctcgctccta
gatgcaattttagttggcctctactggtctaagaagctgaggctgaggggattaaagaag
gacgagttcaggaggataggaggaaagggaggaaccaggatagagataaaattcgaaaac
gacgattcaaagtacgtactcttcagggacttctcgaggaacgtggcataccttaaggtt
caagaaaacgggaagtggaggcatgcatctgagccgagcatggaaagtgtgtcatcttac
atagagaggatcctcccctataacgtcttcttaaatgcgatctacattaggcaaggccaa
atagatgcaattctcgagagcgacgagacgagggataaggttgtcagggaaatactaaac
ctcgacaagcttgaaagcgcctatgaaaaccttaagagaataaagaccaacataaacctt
ctgatagagagtaaaaagtctttcattgcgagaactgagaacattgaggagttaataaag
gcgaacgaggacgagttaaccaaaaagctgtccgagataaacgagataagctctaagcta
cctccaatcaggggggaactcgaaaaggttagagagaatgtcaaggaactcgagagcatt
aagggtaagataagcgagctgaagatccaggtggaaaaactcaagggtaggaagaaggga
cttgaggaaaagatagtccaaatagagaggagtattgaggagaagaaggcaaagatctcg
gagcttgaagaaatcgtgaaagatattcctaaacttcaggaaaaggaaaaagaatatagg
aaactgaaaggcttcagggatgagtacgaatccaaactcaggaggctagagaaggagctg
agcaaatgggaaagtgagctgaaggcgattgaagaggtaataaaggaaggagaaaagaaa
aaggagagggccgaagagataagagaaaagttaagcgagatcgagaagaggctagaggag
ttaaaaccgtacgtagaggagctcgaagatgctaaacaagttcaaaagcagatagaaaga
ttaaaggctaggctcaagggtctgagcccaggagaagttatagagaaactggaaagctta
gagaaggagaggactgagatagaagaggcaataaaggagattaccacaagaattggccaa
atggagcaggagaaaaacgagagaatgaaggcaatagaagagctaaggaaggccaaggga
aagtgtcccgtctgtgggagagagttaaccgaggaacataagaaggagctcatggagagg
tacacccttgagataaagaaaatagaagaggaactcaaaagaaccacggaagaggagaga
aagctcagggtaaatttaaggaagttagaaatcaagcttagggagttctcagttatgagg
gacatcgcagagcagataaaagagttagagagtaaactcaagggcttcaacttggaagag
cttgaacaaaaggagagggaatttgaagggctaaacgaggagtttaacaaactcaaaggt
gaactcctgggactagagagggatttaaagaggataaaagctctggaaggtagaaggaaa
ttgatagaggagaaggtcaggaaagccaaggaggagctggagaaccttcatagacaactt
agagaacttggcttcgagagcgtagaagagctcaacctgagaattcaagagcttgaggag
ttccacgacaagtacgtagaggccaaaaagtctgaaagcgagctgagggagctaaagaac
aaattagaaaaagagaaaacagagctggatcaagcattcgaaatgttagctgacgttgaa
aatgagatcgaagaaaaagaggccaagttgaaggatttagaatcaaagttcaacgaggaa
gagtacgaggagaagagggagaggctagttaaactcgagagggaagtttcttccctaacg
gcaaggctagaggaattgaagaagagcgttgagcagataaaggcaacgctaaggaaatta
aaggaggagaaagaagagagggagaaggcaaagcttgagataaagaaactagaaaaggcc
ctaagtaaagtggaagaccttagaaagaagattaaagattacaaaactcttgcaaaggag
caggctttgaacaggataagtgaaatagcgagcgaaatattctcggagttcaccgatggg
aagtactcaaacgtcatcgttagggctgaggagaacaagacaaagcttttcgttgtgtac
gagggcaaggaagtcccgctaacgtttctaagcggtggggagaggatagcgctgggttta
gcattcagactcgcactttcaatgtacctggtgggcaggatagatctcctaatactagat
gagccgacacccttccttgacgaggagaggagaaggaagctactcgatattatggagagg
catcttaggaggatatctcaggtaatcatggtttcccacgatgaagagctgaaggacgct
gctgattacgtgataaggctaaggttagaaggtggaaagtcaaaggtagaggtggtgtca
tga
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