Pyrococcus abyssi: PAB0824
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Entry
PAB0824 CDS
T00024
Name
(GenBank) ABC transporter ATP-binding protein
KO
K06174
ATP-binding cassette, sub-family E, member 1
Organism
pab
Pyrococcus abyssi
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
pab03009
]
PAB0824
Ribosome biogenesis [BR:
pab03009
]
Eukaryotic type
Pre-40S particles
Other pre-40S particles
PAB0824
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
Fer4_RLI
Fer4_6
AAA
Fer4
Rad17
Fer4_21
AAA_16
Fer4_7
nSTAND3
AAA_15
AAA_14
Fer4_10
Fer4_9
AAA_24
Fer4_2
AAA_28
AAA_22
RNA_helicase
AAA_18
AAA_23
AAA_30
NACHT
DO-GTPase2
SRP54
Fer4_3
TsaE
dNK
NB-ARC
Fer4_16
RNase_Zc3h12a
Fer4_4
AAA_6
Fer4_17
Motif
Other DBs
NCBI-ProteinID:
CAB50155
UniProt:
Q9UZA4
Structure
PDB
PDBj
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All DBs
Position
1207047..1208828
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AA seq
593 aa
AA seq
DB search
MVRKMRIAVIDYDKCNPDKCGHFLCERVCPVNRMGGEAIIIDEENYKPIIQEASCTGCGI
CVHKCPFNAISIVNLPEQLDEDCVHRYGVNAFVLYRLPIVKDGMVVGIVGPNGTGKTTAV
KILAGQLIPNLCEDNDSWDNVIRAFRGNELQNYFERLKNGEIRPVVKPQYVDLLPKAVKG
KVRELLKKVDEVGKFEEVVKELELENVLDRELHQLSGGELQRVAIAAALLRKAHFYFFDE
PSSYLDIRQRLKVARVIRRLANEGKAVLVVEHDLAVLDYLSDVIHVVYGEPGVYGIFSKP
KGTRNGINEFLQGYLKDENVRFRPYEIRFTKLSERVDVERETLVEYPRLVKDYGSFKLEV
EPGEIRKGEVIGIVGPNGIGKTTFVKMLAGVEEPTEGKVEWDLTVAYKPQYIKAEYEGTV
YELLSKIDSSKLNSNFYKTELLKPLGIIDLYDRNVEDLSGGELQRVAIAATLLRDADIYL
LDEPSAYLDVEQRLAVSRAIRHLMEKNEKTALVVEHDVLMIDYVSDRLIVFEGEPGRHGR
ALPPMGMREGMNRFLASVGITFRRDPDSGRPRANKEGSVKDREQKARGEYYYA
NT seq
1782 nt
NT seq
+upstream
nt +downstream
nt
atggtgaggaaaatgaggatcgcggtcatcgattacgataagtgtaatccagataagtgc
ggtcacttcctatgtgagagggtctgtccagttaatagaatgggaggagaagccataata
atagatgaggagaactacaaaccgataattcaggaagctagctgtactggttgtggaatc
tgcgttcataagtgtccttttaacgctataagcatagtaaacctaccagagcaattagat
gaggattgcgttcatagatatggcgtcaatgccttcgttctctacagacttccaatcgtt
aaagatggaatggtcgttgggatagtaggacccaacggaaccggaaagactactgcggtt
aaaatcttggccggacaactgatccccaatctctgtgaagataacgactcctgggataac
gttatcagggcttttaggggaaacgagctacagaactactttgagagacttaaaaacgga
gaaataaggccagtagtcaagcctcagtacgtagatttgcttccaaaagccgtcaaagga
aaagttagagagttactaaaaaaggtcgatgaagtggggaaattcgaagaagttgtaaaa
gagctagagcttgagaacgttctggatagggaacttcaccaactctccggtggagagctt
cagagggttgcaatagccgccgcactactcaggaaagcccacttctactttttcgatgag
ccttcaagttacctcgacataagacagaggctcaaagtcgctagggtcataaggaggctg
gcaaatgaaggaaaggcagtgctcgtagttgagcatgacctggctgttctggattatctt
agcgatgtaatccacgtcgtatatggcgagccgggcgtttatggaatattctcaaagccc
aaggggacgaggaacggtataaacgagttccttcaaggatacctaaaggatgagaatgta
aggttcaggccctacgagataaggttcacaaagctaagcgagagggttgatgttgaaagg
gaaaccttggttgagtatccaaggctagtgaaggattatggaagctttaagctcgaggtt
gagcccggggagataaggaagggggaggtaattggaatagttgggccaaacggaattgga
aagacaacgttcgttaagatgcttgccggagtcgaggagccaactgaagggaaagttgag
tgggatctaaccgtagcttacaagccccagtacattaaggctgagtacgagggaacagtt
tacgagttgctcagcaagatagactcctcaaagctgaacagcaacttctacaagactgaa
ctgttaaagcccctgggaataattgatttgtacgacaggaacgttgaagatttatctgga
ggagagctccagagggtagcaatagccgcaaccctgctgagagatgccgatatctatctc
ctggatgagccatcagcttacttggacgttgaacagaggttggccgtttcgagggccata
aggcacctaatggagaagaacgagaagacagcattggtggttgagcacgatgtcctaatg
atagattacgtgagcgataggttaatagttttcgagggagaacctggaaggcatggaagg
gcattgcccccaatgggcatgagagagggaatgaacagattcctggcctcggttgggata
acgtttagaagagatccagacagcggaaggcctagggctaacaaggaaggttcggtaaag
gatagggagcagaaggcaaggggagaatactactacgcctag
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