Pyrococcus abyssi: PAB0838
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Entry
PAB0838 CDS
T00024
Name
(GenBank) Hypothetical protein, contains helix-turn-helix motif
KO
K23356
HTH-type transcriptional regulator, sugar sensing transcriptional regulator
Organism
pab
Pyrococcus abyssi
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pab03000
]
PAB0838
Transcription factors [BR:
pab03000
]
Prokaryotic type
Helix-turn-helix
Other families
PAB0838
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TrmB
Regulator_TrmB
PLDc_2
TbsP_N
DUF7436
HTH_IclR
Motif
Other DBs
NCBI-ProteinID:
CAB50174
UniProt:
Q9UZ85
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Position
1227147..1227962
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AA seq
271 aa
AA seq
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MTVVKMSKERMVELLQEHFELNLYEARAYVALVAFGVLTPAELASVSEVPAPRTYDVLRS
LEKKGFAMNQPGKTNKYRPVHPANILEKFIQDWQERVKEELEAKKKAKEELLELMAPLIE
TEVPKYGVERVWVVRGIKNSTLKTKEMLGEVQKEILLADDGFIAINLEDDIIKAVDRGVK
AKIILTKNLLPRIKASKIVQYAKDGKLELKVLEKFDLPMLICDEEVFFALEDLAARYFNY
ETQVWIKDHRVVDLFRKKFEEYWKEAEEAKV
NT seq
816 nt
NT seq
+upstream
nt +downstream
nt
atgacggtggtaaagatgagcaaagaaagaatggttgaactattacaagaacattttgaa
ttaaacttatacgaggctagggcatatgttgcactagttgcgtttggtgtccttacacca
gccgagttggcaagcgtttccgaagttcctgctccaagaacttacgacgtcttgagaagt
ttagagaagaagggctttgcaatgaaccagccagggaagacaaacaagtataggccagtt
cacccagcaaacatccttgaaaagttcatacaagattggcaagagagagtcaaagaggag
cttgaggccaagaagaaggccaaagaagagttgctcgagttaatggcaccacttattgag
accgaggttccaaagtacggagttgagagggtctgggtagttaggggaatcaagaactca
acgctaaagacaaaggaaatgctaggagaagtccagaaggaaatactattagcggacgat
gggttcatagcgataaacctcgaggatgacataataaaggccgttgacaggggagttaaa
gcaaagataatcctaacgaagaacctgttacccaggataaaggcatccaagatagtccag
tacgccaaggatgggaagctcgagctcaaggttctcgagaagttcgacttgccaatgttg
atatgcgacgaggaagtgttcttcgcactggaggatttagcggccaggtacttcaactac
gaaacccaggtctggataaaggaccacagggtagtcgacctattcaggaagaagtttgag
gagtactggaaggaagctgaagaagcaaaggtctag
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