Pyrococcus abyssi: PAB1134
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Entry
PAB1134 CDS
T00024
Name
(GenBank) Hypothetical protein, UPF0004 family
KO
K15865
threonylcarbamoyladenosine tRNA methylthiotransferase CDKAL1 [EC:
2.8.4.5
]
Organism
pab
Pyrococcus abyssi
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pab03016
]
PAB1134
Enzymes [BR:
pab01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.5 tRNA (N6-L-threonylcarbamoyladenosine37-C2)-methylthiotransferase
PAB1134
Transfer RNA biogenesis [BR:
pab03016
]
Eukaryotic type
tRNA modification factors
Methylthiotransferase
PAB1134
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
UPF0004
TRAM
DUF2080
RIM2a_ZnF
TPR_HPS5_insect
SnoaL
Motif
Other DBs
NCBI-ProteinID:
CAB50634
UniProt:
Q9UXX9
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All DBs
Position
1705622..1706899
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AA seq
425 aa
AA seq
DB search
MVKIYIENYGCARNRADGEIMAALLHLAGHEIVYDPDEGEIVVVNSCAVKDPTERKIARR
IKELLDSGKKVIVTGCLPHVNPDVIDERVSGILGVKSIDRIIQAVEYALRGEKLISVPDW
RKRNLDKLDFPRLSPRTVYFIVPIAEGCLNACTYCATRFARGVLKSYSPEKIVGWVKWAI
KQGYKEIWLSAEDTGCYGFDIGTNLAKLLDEITAIEGEFRVRVGMMNPNHVLKFLDELIE
AYQDEKIYKFLHLPVQSGDNDILRRMGRNYTVEEFEEIVKEFRKKFPDLNLHTDIIVGFP
GEDDEAFQRSVELIRRIRPDKVNVSRYSPRPGTIAAKWKQLPGWIVKERSRLLHRIRLQI
SYEINQKYIGKKVEVLIHGEGKKGNVDAVTMNYKHVILPFGNSGEFRIAEIKNATSTYLL
GEVMS
NT seq
1278 nt
NT seq
+upstream
nt +downstream
nt
atggtcaagatttacatagagaactacggttgtgctagaaatagggcagatggcgagatt
atggcagctttacttcaccttgccggtcatgaaatagtttacgatccagatgagggcgag
atagtagttgtaaatagttgtgcagttaaggatccaaccgaaaggaagatcgccaggagg
attaaggaattgttagatagcggaaaaaaggtaatagttaccggctgcctccctcacgtt
aatccagatgtaatagatgaaagggtttctggcatattaggcgttaagagcatagatagg
ataattcaagccgtagagtacgctttacggggagaaaaattaataagcgtgccggattgg
agaaaaaggaatctagacaagttagactttcctaggttatcaccaagaacagtttatttc
attgtcccgatagcggaaggctgtttaaatgcttgcacatattgtgcaactaggtttgcg
aggggagttctcaaaagctactcaccggaaaagatagttggttgggttaagtgggccata
aagcaggggtataaagagatatggttatcagcagaagataccgggtgttatggattcgac
atcggaaccaacttagcgaaactcttggatgagattacggcaattgaaggagaatttaga
gtaagggttggcatgatgaatccaaatcacgtgctcaaattcctcgacgagctcatagag
gcttatcaagatgaaaagatttacaagtttttacatttgccagttcaaagtggggacaac
gatatactcagaaggatgggtcggaattataccgtggaggagtttgaggaaatcgttaaa
gagttcaggaaaaagtttccagatttaaatcttcacactgacataatagtgggctttcct
ggggaggatgatgaagcattccagaggagcgttgagctgataagaaggataagacctgat
aaagtcaacgtgtctaggtattccccgaggccaggaactatagcggcaaaatggaaacaa
ctcccgggatggatagttaaggagagatcaaggcttctccacaggataaggctgcagata
agctacgagataaatcagaagtacatcggcaagaaagttgaagttctcatccatggggaa
gggaagaaaggcaacgtagatgccgttacaatgaactacaagcatgtaattttaccattt
gggaatagtggagagttcaggatagctgaaattaaaaacgctacatcaacgtatttactt
ggtgaggtcatgtcataa
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