Pyrococcus abyssi: PAB1196
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Entry
PAB1196 CDS
T00024
Name
(GenBank) dppD-1 dipeptide transport system ATP-binding protein dppD or dppF or oligopeptide transport system ATP-binding protein oppD or oppF
KO
K02031
peptide/nickel transport system ATP-binding protein
Organism
pab
Pyrococcus abyssi
Pathway
pab02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
PAB1196
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pab02000
]
PAB1196
Transporters [BR:
pab02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
PAB1196
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
RsgA_GTPase
nSTAND1
AAA_13
Motif
Other DBs
NCBI-ProteinID:
CAB50653
UniProt:
Q9UXW0
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All DBs
Position
complement(1724065..1725024)
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AA seq
319 aa
AA seq
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MAKKILEVKNLKMYYFTSRGPVKAVDDVTFDLEKGEVLGLAGESGCGKSSIGFTLMGMPQ
PPGRIVSGSIKIDGREIVGLPEDVLRKEIRWQKISMIFQGAMNALNPVYTVGYQMIEPLI
YHRGMSREDALDRAMKYLELVGLDPEIVYRYPHELSGGMKQRVVIATALILEPDIVIADE
PTTALDVVVQAQIINLMKRLKKKLGLSMIFITHDLSILAEISDKIAIMYAGKIVEIGPSE
KVYYEPAHPYTQKLLAAIPRLHEDVEKLEFIPGSPPNLLNPPSGCRFHPRCPYAMDRCKE
EEPKMVEVDKDHYAACWLL
NT seq
960 nt
NT seq
+upstream
nt +downstream
nt
atggctaagaagatactcgaggttaagaaccttaaaatgtactacttcacctcgagaggt
ccagttaaggccgttgatgacgttacctttgacctagagaaaggagaagtccttggatta
gctggagagagtggttgtggtaagtcctcaataggattcacactaatgggaatgccccag
cccccaggaaggatagtaagtgggagtataaagatagatggaagggaaatcgtcggattg
cctgaggacgtgcttaggaaagagattagatggcagaagatttctatgatattccagggt
gccatgaatgctctaaatccggtttacacagttggataccaaatgattgaacctctaata
taccacaggggaatgagcagggaagacgctttggacagagcaatgaaatatttagagctc
gtgggattagatcctgagatagtctaccgctatccacacgagctctccggtggaatgaag
cagagggtcgtcattgcaacggcccttattttagagcctgacatagtgatagcagatgag
cccacaaccgctttggacgtcgtagttcaggcccagataataaacctgatgaagaggctt
aagaagaagcttggcctatcaatgatcttcattacccacgatctcagcatattggcggag
ataagtgacaaaatagcgataatgtacgcaggaaagatcgttgagattggacccagcgag
aaggtttactatgagccagcacatccatacactcagaagctacttgcggcaattccaagg
ttacatgaggacgttgaaaagcttgaattcattccaggaagtccaccaaacctcctgaac
ccgccgagcggttgcaggttccacccgaggtgtccatatgcgatggacaggtgtaaagag
gaagaacctaagatggtggaagttgataaggatcactatgccgcatgttggcttctgtga
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