Pyrococcus abyssi: PAB1307
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Entry
PAB1307 CDS
T00024
Name
(GenBank) mutS-like DNA mismatch recognition protein, muts2 homolog
KO
K07456
DNA mismatch repair protein MutS2
Organism
pab
Pyrococcus abyssi
Pathway
pab03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
PAB1307
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pab03400
]
PAB1307
DNA repair and recombination proteins [BR:
pab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
PAB1307
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
AAA_22
AAA_14
AAA_21
AAA
CPT
AAA_28
Motif
Other DBs
NCBI-ProteinID:
CAB50495
UniProt:
Q9UYB7
LinkDB
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Position
complement(1550726..1552438)
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AA seq
570 aa
AA seq
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MKLKLRGDAREIYRAIRRKIESEIRVSEAKRFLDNFEPVSDVGEILKRQNYLKRAMESVS
EEVEGLLLKVKPIKFRKEFLGDRLLVVSEDEVEEAEKLGLCMVSTEPIEGYDIVLSTIGY
GIDVELKPYEIAPELYIKPLWESRDVLEALARIFPGGAAAKILRELEGIEDVMRRNERLE
NIEEIIRRYESELNKRIEEKLERFKLTLSGKELVEFLRSLRYGDVEAILSKFSSLNDDII
EEIRKAEEKLSQELGVAIEVFPRDYPVEVPPDVVERLKRSVERELKIELYMRAREIVPRI
IPYIQGLKEEIERAYELEFILALKRFSRGFTFPKIEEGGIGFIKGRNLFIENPQPVSYFV
GSAKGQFKGIQESSVVILTGANSGGKTSLLELMLQIVILAHMGLPVPASEAWVEPLDEVF
FFKRKRINYGAGAFESSLKSIVKALKGKGRKLILIDEFEAITEPGAAAKILAELLKIGVE
KGFYIVIVSHLGEDLKKELPYARVDGIEASGLDEELNLIVDRQPKFGVIGKSTPELILER
LARKGRGEEREILMKVLAKLNNTYVPTQNI
NT seq
1713 nt
NT seq
+upstream
nt +downstream
nt
atgaagctcaaactgaggggagatgccagggaaatttatcgtgctataaggaggaagata
gagagtgagataagggttagtgaggctaagaggttccttgataatttcgagccagttagc
gacgttggggagattctcaagaggcagaattaccttaaaagagcaatggaatctgttagc
gaagaggtagaagggttactcctcaaggttaagccaataaagttcaggaaggagttcctg
ggagataggctattggtggttagcgaggacgaagttgaagaggccgagaagcttggcctc
tgcatggtctctacggagccaatagaggggtatgatatagttctcagcacgataggttac
ggtatagacgttgagctcaaaccctatgagatagcccccgagctctacataaagcccctc
tgggagtccagggatgttctggaggcattggccaggattttccctgggggagccgccgct
aagattctccgggagcttgagggaattgaggatgttatgagaaggaatgagcgcttagag
aacattgaagagataattaggaggtatgagagtgaattaaacaagagaatcgaagaaaag
cttgagaggttcaagctgaccctaagtggcaaagagctggtggagttcctgaggtcgcta
cgctacggtgacgtcgaggcgatactatcgaagttctcctctctcaacgatgacataata
gaggagataaggaaagctgaggaaaagctttcccaggaacttggcgtggccatcgaagtc
tttccaagggattatccggttgaagttcctccagatgtagttgagagacttaagagaagc
gttgagagggaattgaagattgaactatacatgagggctagggagatagttccaaggatt
atcccctacattcaagggttgaaggaagagatagagagagcgtacgagctcgaatttata
ctggccttaaagaggttctcacgcggtttcacttttcctaagattgaggagggcgggatt
gggtttataaaggggagaaatctctttatagaaaatccgcaaccggtaagctactttgtt
ggctcggctaagggacaatttaaggggattcaagaatcgagcgtagtgatattgacgggt
gccaatagcggaggcaagacttccttactcgagctgatgcttcagatagtgatattggct
cacatgggcctgcccgttccggctagtgaggcctgggtggaacccttggatgaggtgttc
ttctttaagagaaagaggattaactacggagcaggagcctttgaaagctctctcaaatcg
atagtaaaggccttgaaaggtaaggggaggaagcttatccttatagatgagttcgaagct
ataaccgagcctggagcagcggcgaagatattggccgagttactgaagatcggtgtggaa
aagggattttacatagttatagtttcgcaccttggcgaggacttaaagaaggaactccca
tacgctagggtggatgggatagaggctagtggtttggacgaagaacttaatctaatagtt
gatagacagcccaagttcggtgttataggcaagagcacccctgagctaattcttgaaagg
ttagctagaaagggtaggggagaggagagggaaatactgatgaaggttctcgcaaagttg
aacaatacatatgtacctacacaaaacatataa
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