Pyrococcus abyssi: PAB1530
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Entry
PAB1530 CDS
T00024
Name
(GenBank) alkA 3-methyladenine DNA glycosylase
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
pab
Pyrococcus abyssi
Pathway
pab03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
PAB1530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pab03400
]
PAB1530
Enzymes [BR:
pab01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
PAB1530
DNA repair and recombination proteins [BR:
pab03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
PAB1530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
Motif
Other DBs
NCBI-ProteinID:
CAB50186
UniProt:
Q9UZ73
LinkDB
All DBs
Position
complement(1240256..1241086)
Genome browser
AA seq
276 aa
AA seq
DB search
MMSMIDLAKTTHEMIKNGTWKYEKGIFWQALPQGIIGYDGENFIIPEGLSRKEGKIVKEK
ISFILGLDTDLDSFYSEIEDSKFSFLIDEFYGLTIPAAPSLYQAMVEVIAQQQVSFEFAQ
KAISNLVKLVGRKVNDLYLFPEPSDIIRLGDRIREAKLGYRASYILSITQEYLRGRLKLD
LKDLNEDEAVNYLTKFKGIGRWSAELFLMYGLRKNVYPAGDLGLRRGIAKIFGLNPKKVK
EKDVREIIEPYGKWKSLLAFYILCYDRKTQKPGVRK
NT seq
831 nt
NT seq
+upstream
nt +downstream
nt
gtgatgtcgatgatagacctggcaaaaactacccatgagatgattaagaacggaacgtgg
aagtacgagaaaggtatattctggcaggctctaccccagggaataatcggttacgatggt
gagaactttataatacctgaaggcttaagtaggaaagagggaaaaattgtaaaggaaaag
ataagctttatcctaggcttggatactgacttggactcgttctactctgaaattgaggat
tcaaagttttccttcttaatcgatgagttttatggcttaaccattccagcggcccctagc
ttgtatcaggctatggtggaggttatagctcagcaacaggtaagctttgaattcgctcag
aaggcaataagcaacttagtgaaattagttggtagaaaggttaatgacctctacttattc
ccggaaccctcggatataatcaggcttggagataggattagggaggctaagctgggttac
agggcaagctacatcctttctatcacccaggagtatttaaggggaaggcttaagcttgac
ctaaaagatttaaatgaagatgaagcagtcaattaccttactaaatttaaagggattgga
aggtggagcgccgagctgttcctcatgtacgggttaaggaagaacgtttatcccgccgga
gacttaggacttaggaggggaattgcaaagatattcggcctaaacccgaagaaggttaag
gaaaaggacgtgagggagataatcgagccgtatggaaagtggaagagcttgttggccttt
tacatattatgctacgatagaaaaacccagaagccgggggtgagaaagtga
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