Pyrococcus abyssi: PAB1722
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Entry
PAB1722 CDS
T00024
Name
(GenBank) DEAD/DEAH box RNA helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
pab
Pyrococcus abyssi
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
PAB1722
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
ResIII
Adeno_IVa2
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
CAB49887
UniProt:
Q9V019
LinkDB
All DBs
Position
complement(938160..940778)
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AA seq
872 aa
AA seq
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MIDVFKGLESEIVNLHEIPPRKGSYGSFKFRHEEVNKLVEELGFKLYSHQVEALKLLYSG
KNVVVSTPTASGKSEIFRLFIFDEFLEDSSSTFLLIYPTRALINNQLEKFERENEIFSKI
TGRKVGNSILTGDVELSERRRIRREKPNVIFTTPDMLHYNLLPRWLDYKWLFKNLKLLVV
DELHIYRGVFGSNVAYVFRRLFLRLRRLKVNPRILALSATLKNPKDFAEKFFGFEFEEVT
EAGNPSPKRYIIMFEPTRFSGEQLIRQIVERLVENDVKTLVFFDSRKGTERIMRMFLGSK
VFNLITTYKGTLTKLERWRIESDFREGKLKALLTTNALELGIDVGDLDAVINYGIPSDGL
FSLIQRFGRAGRDPNRVAINGIVLRRNGLDYYYKEHFEELVEGIEKGLVEGIPVNLDNER
IAKKHLHYLLSELGVVDVNEIPEHWRIALRPLKEEGIVEEYLNPLTNKVEIRIKKPAIYS
SIRSTSDESFFLVKDEGWIRSSLVRKSGGELLRFVNYLKARGFIIEEVDEVEFYRSLLPG
MVYPSRGRLFMVIDKINVDKFHFVFAQEIPMNEDVETNVHKSENVEVLKVQDEKSFGPIK
VYFGRLKVTHEYLGYAVKGKDVERHVERLERLRDAGILRGEIEFNVTMFEEWWKFARVSF
YSPYKREFETEGVWLVFPRSIDEVPAEEFRHFFSIASEYNYELAMFLFNKLSRGVLFPSL
LGATTHYIRAVIRKVAKEEGLDENFVFAVKKMVDSKDGVKSGLHAIEHNLIKIAPVVTHV
DSRELGGYSYDDFNGLPTIFIYDGNEGGSGIARLIYENIEKLIVRSREHIAKCPCKDGCP
ACVYSPKCGTFNEFLDKWMAIKIWDKVLNQKV
NT seq
2619 nt
NT seq
+upstream
nt +downstream
nt
atgattgatgtattcaagggattagaaagcgaaatagtcaatctacacgaaattcctccc
cgcaaaggaagttatggaagctttaaatttagacatgaagaagttaataaactcgttgag
gagctcggatttaagctgtactcccatcaagttgaggccctaaagctattgtattccggc
aagaacgttgtcgtttcaacgcccacggcgagtggaaagagcgagatcttcaggctcttc
atatttgatgagttccttgaggactcttcatcaaccttcctgttgatatacccgacaagg
gccctgataaacaatcaacttgagaagtttgaaagggagaacgaaatcttctcgaaaatt
acagggagaaaagtcggaaactcaatactgactggggacgttgagttgagcgagagaagg
agaattagaagagaaaagccaaatgtaatattcacgaccccagatatgttgcactacaat
ctcctcccgagatggttggattacaaatggctctttaagaatctaaagctactcgtcgtg
gacgagcttcacatttacaggggagtcttcggaagcaacgttgcctatgttttcaggagg
ttatttctcaggcttagacgattgaaagttaaccctagaatactagctctctcggccacg
cttaagaatccaaaggacttcgcggagaaattctttggcttcgagtttgaagaggttacc
gaagccggaaacccgagtcccaagaggtacataataatgttcgaacccacgagattcagc
ggagaacagctcataaggcaaatcgttgaaagattagtagagaacgacgtaaaaactctt
gttttcttcgattctagaaaggggactgagagaataatgaggatgttcctgggctcaaag
gtgtttaacttgataaccacttacaagggcacgctgacgaagctcgaaaggtggaggatt
gaaagtgatttcagggaaggaaaactgaaggcactgctaacaacgaatgccctcgagcta
ggtatcgatgttggtgacctagatgccgttataaactacgggataccatccgatggttta
ttctccctaattcagaggtttggaagggctggcagagacccgaatagggttgccataaac
ggcatagtcctccgaaggaacggacttgattattactacaaggaacactttgaagagcta
gttgagggaatagagaaaggtttagtagagggaatacccgtcaacctcgataacgagagg
atagccaagaaacatctccattatctgctctctgaactcggtgtggttgatgttaatgag
atacccgagcattggaggatagcgctaagacctctgaaagaggaaggtatcgttgaggag
tatctgaatcccttgacgaacaaggtggaaattagaattaagaagcctgcaatatactct
tcgattagatccacgagcgatgagagcttcttcctcgtgaaggatgagggatggataagg
tcaagtttagtgagaaagagtggaggagagcttcttagattcgttaattacctcaaagct
aggggattcatcatagaggaagttgacgaggtagagttctacaggagcctgctccctggg
atggtttatccctcgaggggaaggctgtttatggtcatcgacaagattaacgttgataag
tttcacttcgttttcgcccaggagattccaatgaacgaagacgtcgaaacgaacgtccac
aagagtgagaacgttgaggttctcaaggttcaagatgagaagagctttgggccaataaag
gtgtattttggaagattaaaggttacgcatgagtacctcggatacgcggtaaagggtaag
gacgttgagaggcacgttgaaagactggaaaggcttagggatgccggaatattaagaggt
gaaatcgagttcaacgtaactatgttcgaggagtggtggaagttcgctagggtctcgttc
tacagtccatacaagagggagtttgagactgagggagtttggttagtattccccaggagc
atagacgaggttccggcagaggagttcaggcacttcttctcaatagcttccgagtataat
tatgagctcgcaatgttcttgtttaacaagttgagtaggggcgtgttattcccctcactc
cttggagctacaacccactacatcagggccgtcataaggaaagtagcgaaggaagaaggt
ctcgatgagaacttcgtctttgcggtgaagaagatggtggacagtaaagatggtgttaaa
tctgggttgcacgcgatagagcacaatctaatcaagatagcaccggtagttactcacgtg
gattcaagagagctaggaggttatagctatgatgacttcaatgggcttccaacgattttc
atctacgatggcaatgaagggggctctggaatagctaggctcatctatgagaacatagag
aagttaatcgtcaggagtagggagcacatagcgaagtgtccctgcaaggatggctgtcct
gcctgtgtttactcgccgaaatgcggaaccttcaacgagtttttagacaagtggatggcc
atcaaaatatgggataaggttctcaatcaaaaggtttaa
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