Pyrococcus abyssi: PAB1912
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Entry
PAB1912 CDS
T00024
Name
(GenBank) TATA box binding protein TFIIB-BBRE complex, chain B
KO
K03124
transcription initiation factor TFIIB
Organism
pab
Pyrococcus abyssi
Pathway
pab03022
Basal transcription factors
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PAB1912
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pab03021
]
PAB1912
Transcription machinery [BR:
pab03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIB
PAB1912
Prokaryotic type
Archaeal type
TFB
PAB1912
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TFIIB
Zn_Ribbon_TF
BRF2-like_C_cyclin_rpt
HARE-HTH
Zn_ribbon_RRN7
Sigma70_r4
RB_B
Zn_ribbon_LysW
HTH_Tnp_ISL3
Zn_ribbon_IS1595
Auto_anti-p27
Zn_ribbon_tTFIIB
A2L_zn_ribbon
Trm112p
YceG
Lar_restr_allev
FtrD-like
FYDLN_acid
ORC6
Zn_Ribbon_Prim
Motif
Other DBs
NCBI-ProteinID:
CAB49598
UniProt:
Q9V0V5
LinkDB
All DBs
Position
complement(638733..639635)
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AA seq
300 aa
AA seq
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MTKQRVCPVCGSTEFIYDPERGEIVCARCGYVIEENIVDMGPEWRAFDASQREKRSRTGA
PESILLHDKGLSTDIGIDRSLTGLMREKMYRLRKWQSRLRVSDAAERNLAFALSELDRIT
AQLKLPKHVEEEAARLYREAVRKGLIRGRSIESVIAACVYAACRLLKVPRTLDEISDIAR
VEKKEIGRSYRFIARNLNLTPKKLFVKPTDYVNKFADELGLSEKVRRRAIEILEEAYKRG
LTSGKSPAGLVAAALYIASLLEGEKRTQREVAEVARVTEVTVRNRYKELVEKLGIKVPVT
NT seq
903 nt
NT seq
+upstream
nt +downstream
nt
gtgaccaagcaaagggtttgtcccgtttgtggatcaaccgagtttatttacgaccccgaa
aggggtgaaatcgtctgcgcacgctgtggatatgtaatcgaggagaacatagtcgatatg
ggaccagaatggcgtgcttttgatgcttctcagagggagaagcgttctaggacgggtgcg
ccagagagtattttacttcatgacaaggggttgtcgacggatattggcattgataggagt
ttgactgggttgatgagggagaagatgtacaggcttaggaagtggcagtctaggcttaga
gttagtgatgccgccgagcgtaatcttgcattcgccctaagcgagttggatagaattacc
gcccagttaaagcttccaaagcacgttgaggaggaagctgctaggctttatagggaagca
gtaagaaagggtttgatcaggggtaggtctatagagagcgttattgcagcctgcgtttac
gcggcttgtaggctattaaaagtcccgaggactcttgacgaaattagtgatattgctagg
gttgagaagaaggagattgggaggagttatcgttttattgcaaggaatctaaacttgact
ccaaagaaactctttgtaaaacctactgattacgtgaacaagtttgctgacgagcttggg
ttaagcgagaaggttaggaggagggctattgaaattttagaggaggcttacaagaggggt
ttaacgagcggtaaaagcccagcgggattagttgccgcagcactctacattgcatccctc
ttggaaggagagaagagaacccaaagagaagtagcagaagtagcaagagtaacagaagta
acagtaagaaacagatacaaagaactagtagagaagcttggaataaaggttcccgtcact
tga
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