Pyrococcus abyssi: PAB2104
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Entry
PAB2104 CDS
T00024
Name
(GenBank) Hypothetical protein, containing helix-turn-helix motif
KO
K07728
putative transcriptional regulator
Organism
pab
Pyrococcus abyssi
Brite
KEGG Orthology (KO) [BR:
pab00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
pab03000
]
PAB2104
Transcription factors [BR:
pab03000
]
Prokaryotic type
Helix-turn-helix
Other families
PAB2104
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HTH_3
HTH_31
HTH_19
HTH_26
HTH_17
Xre-like-HTH
MerR_1
HTH_25
HTH_8
GP3_package
MqsA_antitoxin
HTH_11
HTH_28
HTH_36
MerR
HTH_7
HTH_29
Motif
Other DBs
NCBI-ProteinID:
CAB49289
UniProt:
Q9V1R0
LinkDB
All DBs
Position
complement(359432..360382)
Genome browser
AA seq
316 aa
AA seq
DB search
MEREEFVEFVERILRRIGFKTLKLNFRGGCFNLVATRSLLLLFIKALANIDKFSEEQAED
LKRLAKLFKASPILVGLRTKNYEMEDGIVYERFGIYAVTPGTLYSMFAEGEPPLIMAERG
GFYVRIDGKRLKDLREKHGYSLSELANILGVSRKSLQRYEKGDSMVTLEVALRLEEVFDE
ALVKPINVLKAKFDEISLSSKPETTLEREVFERLERIGMEVVKVKTAPFNAITTEEEDNI
ELLTGIDEKKTEKTLRRAELVSQMAEIVGSEGMFVLKRARIEVVNKVPILPTRVLEEVRD
ADELLEIINELKEAKS
NT seq
951 nt
NT seq
+upstream
nt +downstream
nt
atggagcgagaggaattcgttgagttcgtcgagaggatattgagaaggatagggtttaag
actttaaagttgaactttaggggaggatgttttaacttagttgcaactaggagtcttctc
ctcctgttcataaaagctctcgctaacatagataagtttagcgaggagcaggccgaagat
ttgaagaggcttgccaagctctttaaggcctcaccaatcctagtcgggcttagaacgaaa
aattatgaaatggaagatggaatcgtttacgagaggtttgggatatacgccgtaacccca
ggaacattgtactcgatgtttgcggaaggagagcctcccctcatcatggcagaaaggggt
ggattttacgttagaattgatggcaaaagactaaaggacttaagggaaaagcacggatac
agcttaagcgaactagcaaatattctgggtgtctcgaggaagagcctccaaaggtacgag
aaaggagattccatggtaaccttggaagttgccctaaggcttgaagaggtatttgacgaa
gctctcgtaaagccgataaacgttctaaaggcaaaattcgatgagatatctctatcatcc
aagccggaaacaacactcgaaagggaagtctttgaaaggcttgagaggatagggatggaa
gtcgttaaggtcaagaccgccccgttcaatgcaataactaccgaggaagaagacaacatc
gagcttctaacgggtatagatgaaaagaagacggaaaaaactctaaggagggccgagctc
gtaagccaaatggccgagatagttggtagcgagggcatgttcgtgttgaagagggcaaga
attgaagtcgtgaacaaggttccaatactacccacgagagttctagaagaggtacgggat
gccgatgaattgcttgaaataataaacgagcttaaggaggctaaatcttaa
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