KEGG   Pyrococcus abyssi: PAB2233
Entry
PAB2233           CDS       T00024                                 
Name
(GenBank) 26S protease regulatory subunit 4
  KO
K03420  proteasome regulatory subunit
Organism
pab  Pyrococcus abyssi
Pathway
pab03050  Proteasome
Brite
KEGG Orthology (KO) [BR:pab00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03050 Proteasome
    PAB2233
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03051 Proteasome [BR:pab03051]
    PAB2233
Proteasome [BR:pab03051]
 Prokaryotic proteasome
  Archaeal regulatory particles
   PAB2233
SSDB
Motif
Pfam: AAA Prot_ATP_ID_OB_C AAA_lid_3 AAA_16 Prot_ATP_ID_OB_N AAA_5 RuvB_N AAA_2 AAA_lid_PRS2_C nSTAND3 AAA_14 AAA_28 AAA_22 DUF815 RNA_helicase TIP49 NPHP3_N AAA_17 ATPase AAA_25 TBCA_PH Mg_chelatase NRBF2 Parvo_NS1 AAA_3 TsaE ERM_helical Rv0250c Prefoldin_2 AAA_18 ZapB ATPase_2 TSNAXIP1_N AAA_33 CENP-F_leu_zip IstB_IS21 ABC_tran AAA_7 Rad17 AAA_30 CorA AAA_24 nSTAND_NTPase5 SSNA1 GIDA_C_1st bZIP_1 OB_PRS7 HALZ Prefoldin TMF_TATA_bd NACHT NB-ARC ORC-CDC6-like LdmS_N DUF4164 Sigma54_activ_2 APG6_N CEP89 Nuf2_DHR10-like DUF7491
Other DBs
NCBI-ProteinID: CAB49111
UniProt: Q9V287
LinkDB
Position
complement(190097..191296)
AA seq 399 aa
MNIMSGDEVQFHENYDDYITYLKRRIRQLELQVRMLEADKERLERELSRLRSEMSRLRQP
PAFAGTVIEVLDDDRAIVQNYNGPRFVVRIAPWIERDKLRPGARVALDQRTMAIIELLPS
SKDPTVLGFEVIERPNVTYNDIGGLKKQLQELREAIELPLKHPELFEEVGIDPPKGVLLY
GPPGCGKTLMAKALAHEVNATFIRVVGSELVRKYIGEGARLVHELFELAKEKAPTIIFID
EIDAIGAKRMDETTGGEREVNRTLMQLLAEMDGFDPRGNVKVIAATNRPDILDPALLRPG
RFDRLIEVPLPDFEGRLEILKVHTRRMKLKNVDLRVIAEITEGASGADLKAIATEAGMFA
IRERRTYVTQEDFLKAVDKVLGNERKLLQQITSHEIIYG
NT seq 1200 nt   +upstreamnt  +downstreamnt
gtgaatataatgagcggtgacgaagttcaattccacgaaaattacgatgattacataact
tacctcaagaggagaataaggcagcttgaactccaagtgagaatgcttgaagctgacaag
gagagactcgagagggaattatcgaggcttagatccgaaatgtcgcgattaaggcaacca
ccggcattcgctggaaccgtgatagaggtacttgacgatgacagggccatagttcagaac
tacaacgggccaaggttcgtggttaggatagcgccatggatagagagggacaagcttaga
ccaggggctagagttgccctggatcagaggacaatggcaatcatagagttgctaccaagc
tccaaggacccaaccgtcctaggatttgaggttatagagaggcccaatgttacttacaac
gacataggcggcctaaagaagcaactgcaagagctaagggaagcgatagagttgccactt
aagcacccagagctctttgaggaagtcggtattgatccgccaaagggcgttctcctctat
ggcccacctggatgtgggaagacattgatggcgaaagctttagcgcatgaggtgaatgca
acgttcataagggtcgtcggaagcgagctggtcagaaagtacataggcgaaggtgctagg
ctagtccacgagctctttgaattggccaaagaaaaagctccaactataatattcatagac
gaaattgatgcaataggtgccaagagaatggatgagaccacaggaggagaaagggaagtt
aatagaacattaatgcaacttctagccgagatggatggcttcgatcccaggggaaacgtt
aaggttatagccgcaactaacagacccgatatattggatccagcacttcttaggccaggc
aggtttgacagactcatcgaggttccgttgccagacttcgaaggtaggcttgaaatactc
aaggttcatacgaggaggatgaagcttaagaacgttgatctaagggtcattgcagagata
acagagggggcaagtggagcggacttaaaggccatagctacggaagcgggtatgtttgcc
ataagggagaggagaacgtacgtaacccaggaagactttctaaaagcagtcgataaggtt
cttggtaacgagaggaagttactgcaacagataacttcccatgagataatatacggttaa

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