Parabacteroides absconsus: NEE14_000850
Help
Entry
NEE14_000850 CDS
T10821
Symbol
recJ
Name
(GenBank) single-stranded-DNA-specific exonuclease RecJ
KO
K07462
single-stranded-DNA-specific exonuclease [EC:3.1.-.-]
Organism
pabc Parabacteroides absconsus
Pathway
pabc03410
Base excision repair
pabc03430
Mismatch repair
pabc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pabc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
NEE14_000850 (recJ)
03430 Mismatch repair
NEE14_000850 (recJ)
03440 Homologous recombination
NEE14_000850 (recJ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
pabc03400
]
NEE14_000850 (recJ)
DNA repair and recombination proteins [BR:
pabc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
RecJ
NEE14_000850 (recJ)
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
NEE14_000850 (recJ)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
NEE14_000850 (recJ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecJ_OB
DHH
DHHA1
Toprim
Motif
Other DBs
NCBI-ProteinID:
WWV66575
LinkDB
All DBs
Position
complement(213260..214987)
Genome browser
AA seq
575 aa
AA seq
DB search
MTNKWNYQPPTQTEIQERDHLAAELGLSPVISLLLVRRGLKTAKEVKKFFRPSLNDLEDP
FLMPDMQKAVSRLNQALGEKEKILIYGDYDVDGTTAVSLVYKYLRAYTSNLYYYIPDRYD
EGSGISIKGIDYAHSIGVTLIISLDCGIKAIDKIEYAKEKGIDFIICDHHMPDETLPDAV
AVLDAKREDSIYPYEHLSGCGVGFKFMQAFAISNKRPFSELEKLLEFTAVSIASDIVPIT
GENRILAYYGLRQINSNPSLGLKGIIDVCGLSGKEITISDIVFKIGPRINASGRMMKGEE
AVELLLAKDSAVARKMSENINQYNEERRELDKKITDEANAIINEFNDIDHQKAVIVYNPK
WHKGIIGIVASRLTEKYYRPAVVLTKSSDLITGSARSVTGFDIYKAIEGCRDLLESFGGH
TYAVGFSLKEENLEAFKQRFFQLAAEHIIPEQMIPQLDIDAILDLKEITPKFLSDLKKMS
PFGPNNQKPIFCTYGVQDYGTSKLVGRDQEHIKLEIIDSKSASVPIHGIAFGMSQYNAHI
KLMKPFNICYTIEESIYNGNASFQLMIKDIQTETT
NT seq
1728 nt
NT seq
+upstream
nt +downstream
nt
atgactaacaaatggaattatcaacctccaacacagacagaaattcaagaaagagaccat
ctggctgccgaactgggactcagtccggttatcagtttactattggtccggcgtggatta
aaaactgccaaagaggtaaagaagttcttcagacctagtctgaatgacttggaagatcct
tttttaatgcctgacatgcagaaagcggtcagccggctaaatcaggcattaggtgaaaag
gagaaaatccttatctacggggattatgatgttgacggcacaacagctgtgtcgttggtg
tataagtatctgagagcttatacatcgaatttgtattactatattcctgaccggtatgat
gaaggttctggaatatccattaaagggatagattatgcacatagcataggtgtcaccctg
atcatttcgttagattgcggtattaaagcgatcgacaagattgaatatgcaaaagagaaa
ggcatagactttatcatttgcgaccaccacatgccggatgagactcttccggatgccgtt
gctgtgctcgatgccaaacgagaagactcaatttatccgtatgaacatctctcgggctgt
ggagtcggattcaagtttatgcaggcttttgccatcagcaataagcgtcctttttctgag
ttggaaaagcttctggagtttacagcagtcagtattgcctctgatatcgtccctatcacg
ggcgagaacagaatactcgcctattacggacttcgccaaatcaacagcaatccaagtcta
ggactaaagggaattattgacgtatgtggattatccggtaaggaaatcaccatcagtgac
attgtattcaagattggtccacgtatcaatgcttcagggcgcatgatgaaaggggaagaa
gccgttgaattattactggccaaagacagtgcggttgcacgtaagatgagcgagaatatc
aatcaatataatgaagaacggcgggaactcgataaaaagattactgatgaagctaatgct
atcatcaatgaatttaacgatatagaccatcaaaaggcagtcattgtctacaatccgaaa
tggcataaaggtattatcggaattgtagcttcccgacttaccgaaaagtactatcgtcct
gctgttgttctgacaaaatcgtctgatctgattacaggatcggcccgttctgtcacaggt
ttcgatatctataaagccattgaaggatgtcgagacttattagaaagctttggtggccac
acctatgccgtgggtttctctttgaaagaagagaatctggaagcattcaaacagcgtttc
ttccagttagctgcggaacacatcataccggaacaaatgattcctcaattggatattgat
gcgattctggatttgaaagagattacgcccaaattcctgagtgatctgaaaaagatgagt
ccatttggtccgaacaatcagaagccaatcttctgtacatatggtgtgcaggactacggc
accagcaagcttgttggaagagatcaggaacatattaaattggagattatcgacagcaaa
tcagccagtgtacccattcatggcattgctttcggcatgagtcagtataatgcacatata
aagctgatgaaaccttttaatatttgctataccatcgaagaaagcatttacaacgggaat
gcgtcttttcagctgatgattaaggatatacaaaccgaaacaacataa
DBGET
integrated database retrieval system
