Parabacteroides absconsus: NEE14_002020
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Entry
NEE14_002020 CDS
T10821
Symbol
carB
Name
(GenBank) carbamoyl-phosphate synthase (glutamine-hydrolyzing) large subunit
KO
K01955
carbamoyl-phosphate synthase large subunit [EC:
6.3.5.5
]
Organism
pabc Parabacteroides absconsus
Pathway
pabc00220
Arginine biosynthesis
pabc00240
Pyrimidine metabolism
pabc00250
Alanine, aspartate and glutamate metabolism
pabc01100
Metabolic pathways
pabc01110
Biosynthesis of secondary metabolites
pabc01240
Biosynthesis of cofactors
Module
pabc_M00051
De novo pyrimidine biosynthesis, glutamine (+ PRPP) => UMP
Brite
KEGG Orthology (KO) [BR:
pabc00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
NEE14_002020 (carB)
09105 Amino acid metabolism
00250 Alanine, aspartate and glutamate metabolism
NEE14_002020 (carB)
00220 Arginine biosynthesis
NEE14_002020 (carB)
Enzymes [BR:
pabc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.5 Carbon-nitrogen ligases with glutamine as amido-N-donor
6.3.5.5 carbamoyl-phosphate synthase (glutamine-hydrolysing)
NEE14_002020 (carB)
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Gene cluster
GFIT
Motif
Pfam:
CPSase_L_D2
CPSase_L_D1
CPSase_L_D3
MGS
ATP-grasp
Dala_Dala_lig_C
ATPgrasp_Ter
GARS_A
RimK
ATP-grasp_3
GSH-S_ATP
ATP-grasp_5
Motif
Other DBs
NCBI-ProteinID:
WWV66791
UniProt:
A0ABZ2IRL6
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All DBs
Position
468875..472096
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AA seq
1073 aa
AA seq
DB search
MKDNINKVLILGSGALKIGEAGEFDYSGSQALKAIKEEGIKTVLINPNIATVQTSEGVAD
TVYFLPVTPYFVEKVIEKERPDGILLAFGGQTALNCGVALYQSGVLEKYAVRVLGTPVQA
IMDTEDRELFVHRLDEIGVKTIKSEAVENIEDARRAAAELGYPVIIRAAYALGGLGSGFC
DNEEELNVLAEKAFSFSPQVLVEKSLKGWKEVEYEVVRDRYDNCITVCNMENFDPLGIHT
GESIVIAPSQTLSNTDYHKLRELAIRIIRHIGIVGECNVQYAYDPDSEDYRVIEVNARLS
RSSALASKATGYPLAFVAAKLGLGYGLFDLKNSVTKTTSAFFEPALDYVVCKIPRWDLGK
FHGVARELGSSMKSVGEVMAIGRTFEEAIQKGLRMIGQGMHGFVENKELVIPDIDKALRE
PTDRRIFVISKAFRAGYTIDQIHDLTKIDKWFLQKLYRIIQTANELEAFSKIQEVSDDLL
RKAKMQGFSDFQIARALLKEKMEDTDKATLQVRQDRKYRGIVPVVKQIDTLAAEYPAQTN
YLYLTYNGTENDVHYLGDGRSIVVLGSGAYRIGSSVEFDWCGVQALNTIRKEGWRSVMIN
YNPETVSTDYDMCDRLYFDELTFERVMDILELENPHGVIVSTGGQIPNNLAMRLDAQHVH
ILGTSAQSIDNAEDREKFSAMLDRIGVDQPRWKELSSMDDINQFVEEVGFPVLVRPSYVL
SGAAMNVCSNQDELVRFLELAANVSKKHPVVVSQFIEQCKEVEMDAVAQNGEIIMYAISE
HIEFAGVHSGDATIQFPAQKLYVETVRRIKKISKQIAKELNISGPFNIQYLAKGNEIKVI
ECNLRASRSFPFVSKVLKINFIELATRVMLGLPVEKPNKNEFDLDYVGIKASQFSFNRLQ
KADPVLGVDMASTGEVGCIGDDVSEAILKSMLSVGQRIPEKNILLSTGTAKQKVAMLDAA
RLLAQKGYNLYATGGTHRFFTENGIPSTLVYWPSETGKEPQALRLLHEKKIDMVVNIPRD
LSAGELDNGYKIRRAAIDLNIPLITNARLASAFINAFCTLSLDDIQIKSWQEY
NT seq
3222 nt
NT seq
+upstream
nt +downstream
nt
atgaaagataatataaataaagtccttattttaggttcaggagctctgaagattggtgaa
gcaggagaatttgattattccggaagccaggcattaaaagctattaaagaagaaggtatt
aaaacggttttgatcaatccgaatattgctacagtacagacttctgagggagttgctgat
acggtttatttcttgcctgttactccttattttgtagagaaggtaattgagaaagaacgc
ccggacggtattttactggcttttggtggtcagacagctttgaactgtggtgtcgctttg
tatcagagtggtgtattggagaaatatgcagtgcgtgttttgggtacgccggtacaggct
attatggatacagaagaccgcgaactgtttgtacatcgtttggatgagattggtgttaag
accatcaagagtgaagccgttgaaaatattgaagacgcacgtcgggcagcagccgaatta
ggatatccggttattatccgtgctgcatatgctttaggaggacttggttcgggtttctgt
gataatgaagaagaactgaatgtgctggctgaaaaagccttttcattctcacctcaggtg
ttggtggaaaagagtctgaaaggttggaaagaagtagaatatgaagtagtacgtgaccgt
tatgataactgtatcacggtttgtaacatggagaacttcgacccgctgggaatccatacc
ggagaaagtatcgtgattgctccttctcagacattatccaatacggattatcataaactg
cgtgaactggccatccgcattattcgtcatataggtattgtaggtgaatgtaatgtacaa
tatgcttacgatccggatagtgaagattaccgggttattgaagtaaatgcccgattgagc
cgttcatctgctctggcttcaaaggcaaccggttatccgttggctttcgtggctgctaag
ttaggcttgggatacggtttgttcgacttgaaaaactcagtaacgaagacaaccagcgct
ttctttgaaccggcacttgactatgtagtatgtaagattccgcgttgggacttgggtaaa
ttccatggtgtagcacgagaattaggctcaagcatgaagtcggttggtgaagtcatggct
atcggacgaacctttgaggaagctatccagaaaggtctccgtatgattggtcagggcatg
cacggctttgtagaaaataaggaactggttattccagatattgataaggccttgagagag
ccgaccgatcgtcgtatcttcgttatcagtaaggctttccgtgccggttatacgatcgat
cagatccatgatctgactaagattgataaatggttcttgcagaaattatatcgaatcatc
cagactgccaatgaactggaagcattcagtaagatacaggaagtttcagacgatttactg
cgcaaggccaagatgcagggcttttctgatttccagatcgcccgtgctttgttgaaggag
aaaatggaagataccgacaaagcaactttacaagtccgtcaggatcgtaaatatcgtggt
attgttccggttgttaaacagattgatacattggcagctgaatatcctgctcagaccaat
tatctgtatctgacttataatggtacagagaatgatgttcattatttaggcgacggtcgt
tcgattgttgtattgggttcgggtgcttatcgaatcggtagttcggttgaatttgactgg
tgcggcgttcaggctttgaatacgattcgtaaagaaggctggcgttcggtaatgatcaat
tataatccggaaacggtttctacggattatgatatgtgcgaccgcctgtattttgatgaa
ctgacattcgaacgtgtaatggatatcctggaactggagaatccgcacggtgtgattgta
tcaacgggtggacagattccgaataacctggcaatgcgtctggatgcacagcatgttcat
attttaggaacttcagctcaaagcattgataatgcagaagaccgtgagaagttctcagct
atgcttgaccgcatcggtgttgatcagcctcgctggaaagaactttcatccatggatgat
attaaccagttcgtagaagaagtaggtttcccggttctggttcgtccgagttatgtgctg
agtggtgctgccatgaatgtatgttccaaccaggatgaattggttcgcttcctggaactg
gccgctaatgtttcgaagaagcatccggttgtagtcagccagttcattgagcagtgcaag
gaagtggaaatggatgctgttgcacaaaacggagaaatcatcatgtatgccatcagtgag
catatcgaatttgctggtgtccattccggtgatgctaccattcagttcccggcgcagaaa
ctgtatgtggaaacagttcgtcgtattaagaagatcagtaagcagattgctaaagaatta
aatatctcaggaccgttcaatattcaatacctggcgaaaggaaatgaaatcaaggtaatt
gaatgtaacctgcgtgcttctcgtagtttcccgtttgtcagcaaggtattgaagattaac
ttcatcgaactggctactcgggttatgttaggtctgccggtggaaaagccgaacaagaac
gagtttgatttggactatgtaggtattaaggcctctcagttctcattcaaccgtttgcag
aaggcagatcctgtcttgggtgtagatatggcttctacgggtgaagttggttgtatcggt
gatgatgtttcggaagcaattctgaagagtatgctttctgtcggacaacgtattccggaa
aagaacattctgttatcaaccggtactgctaaacagaaagtagctatgctggatgctgca
cgtctgttggctcagaaaggttataatttgtatgcaacgggtggtacacaccgcttcttt
actgaaaatggcattccaagtacattggtatattggccaagtgaaaccggaaaagaacct
caggctttgagattgttgcatgagaagaagattgatatggtagtgaatataccaagagat
ctttctgccggtgagttggacaatggatataagattcgtcgtgcggccatcgatttgaat
attccgttgattacgaatgctcgtttggcgagtgcatttattaatgcattctgtacattg
agtctggatgatattcagatcaagagctggcaagaatattga
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integrated database retrieval system