KEGG   Parabacteroides absconsus: NEE14_002980
Entry
NEE14_002980      CDS       T10821                                 
Name
(GenBank) 3'-5' exonuclease
  KO
K02342  DNA polymerase III subunit epsilon [EC:2.7.7.7]
Organism
pabc  Parabacteroides absconsus
Pathway
pabc03030  DNA replication
pabc03430  Mismatch repair
pabc03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:pabc00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    NEE14_002980
   03430 Mismatch repair
    NEE14_002980
   03440 Homologous recombination
    NEE14_002980
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pabc03032]
    NEE14_002980
   03400 DNA repair and recombination proteins [BR:pabc03400]
    NEE14_002980
Enzymes [BR:pabc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     NEE14_002980
DNA replication proteins [BR:pabc03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    DNA polymerase III holoenzyme
     NEE14_002980
DNA repair and recombination proteins [BR:pabc03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    DNA polymerase III holoenzyme
     NEE14_002980
SSDB
Motif
Pfam: RNase_T RNase_H_2 Rv2179c-like DNA_pol_B_exo1 DUF6655
Other DBs
NCBI-ProteinID: WWV66970
UniProt: A0ABZ2IUD1
LinkDB
Position
complement(703930..704493)
AA seq 187 aa
MKILFFDLETTGIRYWRNGIHQISGEVVIDGECKESFNFHVRPNPQCDVDEEALKICHVT
KEQIFAYPPMEEVYKQFVQMLSKYVDKYDRTDKFFLAGYNNSSFDNYFLKAFFVQNGDNY
FYSWFWVNSIDVMVLATQHLLEERHKMPDFKQETVARALGIELEADKLHNASYDIYLTRE
IYKRLIG
NT seq 564 nt   +upstreamnt  +downstreamnt
atgaaaatactcttttttgatttggaaacgacggggatccgttattggcggaacggaata
catcagatcagtggcgaggtcgtcattgacggagaatgcaaagagtcttttaatttccat
gtccgtccgaatcctcaatgtgatgttgatgaagaggcattgaaaatatgccacgtaacc
aaagaacagattttcgcctatccaccgatggaagaggtttacaagcagtttgtacaaatg
ctttccaaatatgtcgataaatacgaccggaccgataaattcttcctggccggttataat
aattcttcgttcgacaactacttcctgaaagccttttttgtacagaacggagacaattat
ttttattcctggttttgggtcaactcgattgatgtgatggtgctggctacccagcatttg
ctggaagaacggcataaaatgcccgacttcaagcaggaaacggtagctcgtgccttaggt
atcgagctggaagccgacaagctgcataatgcttcgtatgatatttatttaacccgggaa
atttataaacgcctcattggataa

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