Parabacteroides absconsus: NEE14_003090
Help
Entry
NEE14_003090 CDS
T10821
Symbol
glyA
Name
(GenBank) serine hydroxymethyltransferase
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
pabc Parabacteroides absconsus
Pathway
pabc00260
Glycine, serine and threonine metabolism
pabc00460
Cyanoamino acid metabolism
pabc00630
Glyoxylate and dicarboxylate metabolism
pabc00670
One carbon pool by folate
pabc00680
Methane metabolism
pabc01100
Metabolic pathways
pabc01110
Biosynthesis of secondary metabolites
pabc01120
Microbial metabolism in diverse environments
pabc01200
Carbon metabolism
pabc01230
Biosynthesis of amino acids
pabc01240
Biosynthesis of cofactors
pabc04981
Folate transport and metabolism
Module
pabc_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
pabc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NEE14_003090 (glyA)
09102 Energy metabolism
00680 Methane metabolism
NEE14_003090 (glyA)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NEE14_003090 (glyA)
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
NEE14_003090 (glyA)
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
NEE14_003090 (glyA)
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
NEE14_003090 (glyA)
Enzymes [BR:
pabc01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
NEE14_003090 (glyA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SHMT
Aminotran_1_2
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WWV66990
LinkDB
All DBs
Position
complement(729133..730413)
Genome browser
AA seq
426 aa
AA seq
DB search
MKRDNIIFDIIEKEHQRQLKGIELIASENFVSDQVMQAMGSCLTNKYAEGYPGKRYYGGC
EVVDQSETIAIERLKKLFHAEWVNVQPHSGAQANAAVLLAVLKPGDTFMGLNLAHGGHLS
HGSSVNSSGILYHPVEYNVKEETGRVDYDQMEEVALREKPKLIIGGGSAYSREWDYKRMR
QIADEVGALLMIDMAHPAGLIAAGLLNNPLEYAHIVTSTTHKTLRGPRGGIILLGKDFEN
PWGKKTPKGEIKKMSQLLDSAVFPGIQGGPLEHVIAAKAVAFGEALEPEYKDYQTQVKKN
AATMAQAFIDKGYKIISGGTDNHSMLIDLRTKFPDLTGKVAEKALVAADITVNKNMVPFD
SRSAFQTSGIRIGTPAITTRGAKEELMGEIVEMIDTVLAAPECDKTITAVREKVNSIMKE
YPIFAW
NT seq
1281 nt
NT seq
+upstream
nt +downstream
nt
atgaaaagagacaacatcatttttgacatcattgagaaagaacatcagcgccagctgaaa
ggtattgaactgattgcttcagagaattttgtaagtgatcaagtaatgcaggcaatgggt
agctgcttgacaaataagtatgccgaaggttatcccggtaagcgttattatggcggatgc
gaggtcgttgaccagagcgaaacgattgcgatcgaacgcctgaaaaaattattccatgct
gaatgggtgaatgtacagcctcactcaggagctcaggccaatgccgctgtattgttggct
gttctgaagccgggtgatacttttatgggcttgaacctggcacacggcggacacctttct
cacggctcatcagtaaacagttctggtatcttgtatcatccagttgaatataatgtaaaa
gaagaaaccggtcgtgtggattatgaccagatggaagaagtggctctgcgcgaaaaaccg
aaattgatcattggtggcggttcggcatactcacgtgaatgggattataagcgtatgcgt
caaatcgccgacgaagtaggtgctttgctgatgattgatatggcgcatccggcaggtttg
attgcggcaggtttattgaataatccgttggaatatgctcatatcgtaacgtctaccact
cacaagacattgcgtggacctcgcggtggtatcatcttgctgggtaaagacttcgaaaat
ccttggggaaagaagacaccgaagggcgaaatcaagaaaatgtctcagttattggattct
gccgtattcccgggcattcagggaggaccgctggaacatgttattgctgctaaggccgta
gccttcggcgaagctttggaaccggaatataaagactaccagactcaggtgaagaagaat
gccgctactatggcacaagcattcatagataaaggatataagatcatttcgggtggtacc
gataaccacagtatgttgatcgatctgcgtacgaagttccctgatctgaccggtaaagtt
gctgaaaaagcactggtagctgccgacattacagttaataagaacatggttccgtttgac
agccgttctgctttccagacatctggtatccgtatcggtacgccggctattacgactcgt
ggtgcgaaggaagaactgatgggtgaaatcgtcgagatgattgatactgttttagcagca
cctgaatgcgacaagacgatcacagccgttcgcgaaaaggtaaacagcatcatgaaagaa
tatcctatttttgcttggtaa
DBGET
integrated database retrieval system