Parabacteroides absconsus: NEE14_004715
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Entry
NEE14_004715 CDS
T10821
Symbol
lysA
Name
(GenBank) diaminopimelate decarboxylase
KO
K01586
diaminopimelate decarboxylase [EC:
4.1.1.20
]
Organism
pabc Parabacteroides absconsus
Pathway
pabc00300
Lysine biosynthesis
pabc00470
D-Amino acid metabolism
pabc01100
Metabolic pathways
pabc01110
Biosynthesis of secondary metabolites
pabc01120
Microbial metabolism in diverse environments
pabc01230
Biosynthesis of amino acids
Module
pabc_M00526
Lysine biosynthesis, DAP dehydrogenase pathway, aspartate => lysine
pabc_M00527
Lysine biosynthesis, DAP aminotransferase pathway, aspartate => lysine
Brite
KEGG Orthology (KO) [BR:
pabc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NEE14_004715 (lysA)
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NEE14_004715 (lysA)
Enzymes [BR:
pabc01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.20 diaminopimelate decarboxylase
NEE14_004715 (lysA)
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Motif
Pfam:
Orn_Arg_deC_N
Orn_DAP_Arg_deC
Ala_racemase_N
WH_Rok
Motif
Other DBs
NCBI-ProteinID:
WWV67291
LinkDB
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Position
complement(1110320..1111477)
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AA seq
385 aa
AA seq
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MLKGKFPIDKFKELKTPFYYYDVDLLNETLQTIQAESGKYGYHVHFAIKANANPRLLSII
AAAGLGADCVSGGEVEAAIKAGFPAEKIVFAGVGKADWEINLGLDENIFCFNVESLAELR
VINELAAAKNKVARVALRINPDVDAHTHAKITTGLKENKFGINLGLLNGVLDEMKAMSHV
RLIGIHCHIGSQITDMSAFRNLAIRINEIQEELEKKGIQVENLNLGGGLGIDYYHPNHLS
IPAFDNYFAVFHKLLDLRPGQQVHFEPGRSVVAQCGSLISRVLYVKEGEVKKFAILDAGF
TDLIRPAMYDAYHRIENISSDNDVEVYDVVGPICESSDVFGKDVELNEVHRGDFIALRSA
GAYGEVMASQYNCRQLPAAYFSDQL
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaggtaaatttccgattgataaattcaaggagctgaagactcctttttattat
tatgatgttgacttgttgaacgaaaccctgcagacaattcaggctgaatccggaaaatac
ggatatcatgtacattttgccatcaaggcaaatgccaatccgcgtctgctgtcaataatt
gctgcggcaggcttgggcgctgattgtgtgagcggaggtgaagttgaagctgccatcaag
gctggttttccggcagaaaagatcgtctttgccggagtaggtaaggctgattgggaaatc
aatttagggcttgatgagaatatcttctgcttcaatgtagaatcgttggctgaattgcgt
gttatcaatgaactggctgcagccaagaacaaggtggctcgtgtggctttgcgtattaac
ccggatgtagatgctcatacccatgctaagataactaccggtctgaaggaaaataaattc
ggtatcaatttgggattattaaatggcgtactggatgaaatgaaagccatgtcgcacgta
cgtctgattggtatccattgtcatattggttcccagataacagatatgtccgctttccgt
aacttggctattcggatcaatgagattcaggaagaattggaaaagaaaggcatacaagta
gagaacttgaatttaggaggtggtttgggcatagattattatcatccgaaccatttgtca
atacctgccttcgataattattttgctgtcttccacaaactgctggatttgcgtccaggt
cagcaggtacattttgaaccgggccgttcggtagtagctcaatgtggctcattgatttct
cgggtattgtatgtcaaggaaggagaagtcaagaagtttgctattctggatgccggtttt
accgatctgattcgcccggccatgtatgatgcctatcatcgtatcgaaaatatttccagt
gacaatgatgtagaagtttacgacgtagtcggtccgatctgtgaatcatcagatgtcttt
ggaaaagatgttgagctgaacgaagttcatcggggtgattttattgccttgcgttcggca
ggagcttatggtgaggtgatggcttctcaatataattgccgtcagcttcctgcagcatat
ttctcggatcaattataa
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