Parabacteroides absconsus: NEE14_005375
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Entry
NEE14_005375 CDS
T10821
Symbol
rfbB
Name
(GenBank) dTDP-glucose 4,6-dehydratase
KO
K01710
dTDP-glucose 4,6-dehydratase [EC:
4.2.1.46
]
Organism
pabc Parabacteroides absconsus
Pathway
pabc00521
Streptomycin biosynthesis
pabc00523
Polyketide sugar unit biosynthesis
pabc00525
Acarbose and validamycin biosynthesis
pabc00541
Biosynthesis of various nucleotide sugars
pabc01100
Metabolic pathways
pabc01110
Biosynthesis of secondary metabolites
pabc01250
Biosynthesis of nucleotide sugars
Module
pabc_M00793
dTDP-L-rhamnose biosynthesis, glucose-1P => dTDP-L-Rha
Brite
KEGG Orthology (KO) [BR:
pabc00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 Biosynthesis of various nucleotide sugars
NEE14_005375 (rfbB)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
NEE14_005375 (rfbB)
01055 Biosynthesis of vancomycin group antibiotics
NEE14_005375 (rfbB)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
NEE14_005375 (rfbB)
00525 Acarbose and validamycin biosynthesis
NEE14_005375 (rfbB)
Enzymes [BR:
pabc01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.46 dTDP-glucose 4,6-dehydratase
NEE14_005375 (rfbB)
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Motif
Pfam:
GDP_Man_Dehyd
Epimerase
Polysacc_synt_2
3Beta_HSD
NAD_binding_4
RmlD_sub_bind
NifZ
Motif
Other DBs
NCBI-ProteinID:
WWV67403
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Position
1254440..1255585
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AA seq
381 aa
AA seq
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MKTYLVTGAAGFIGANFIKYMLAKYDDIQIVVLDLLTYAGNLGTIASDIDNKRCFFVKGN
ICDRELADQLFAKYAFNYVVNFAAESHVDRSIENPQLFLQTNILGTQNLLDAARQAWTTG
KDATGYPTWRTDVRFHQVSTDEVYGSLGATGYFTETTPLNPHSPYSASKTSADLFVQAYA
DTYKMPVSITRCSNNYGPYHFPEKLIPLIIKNILEGKKLPVYGDGSNVRDWLYVEDHCKA
IDLVIHKGKAGEVYNVGGHNEKTNLEIVKLTIRTIRQLMEEEPQYRNVLKKKEMGADGQL
SIDWINDDLITFVKDRLGHDQRYAIDPSKIQRELGWLPETSFETGIVKTIRWYLENQAWV
EDITGGDYMQYYERMYKGREL
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgaagacttatttagtgacaggtgccgccggttttatcggtgccaactttatcaaatat
atgctggctaagtacgacgatatccaaattgttgtacttgatttgttaacgtatgccggc
aatttaggaaccattgccagcgacatcgacaacaagcgttgcttttttgtcaaaggaaat
atctgcgaccgcgaattggctgatcagctgtttgccaaatacgcatttaattatgtagtc
aattttgccgctgaaagtcatgtagaccgtagtattgagaatccgcagctcttcctgcaa
accaatatcttaggtacacagaatctgctggatgctgcccgccaagcctggacaacaggc
aaggatgcgaccggatatccgacatggcgtaccgatgttcgtttccaccaggtttctacc
gatgaagtatatggcagcttaggtgctaccggatattttacggaaacgacacctcttaat
ccgcatagtccgtacagtgcttccaagacgagcgcagatttgtttgtacaggcttatgcc
gatacctacaaaatgccagtcagcattacacgctgctccaacaattacggtccttatcat
ttccctgaaaaactgattccgcttattatcaagaatattctggaaggaaagaaactgccg
gtttatggagacggttcgaatgtccgcgactggctgtatgtagaagaccattgtaaagcc
atcgatctggtgatccataaaggcaaagccggtgaagtttataatgtaggcggacacaac
gagaagaccaacctggaaattgttaaattgactattcgtaccatccgccagttaatggaa
gaggaacctcaatatcggaatgtactgaagaaaaaggaaatgggtgcagacggacagctt
tctattgactggatcaatgatgacctgatcacattcgtcaaagaccgcttgggacatgac
cagcgatatgccattgatccttccaaaatccagagagaactgggttggcttccggaaacc
agcttcgagacaggtattgtcaagactatccgctggtatctggaaaaccaggcatgggtg
gaagatatcaccggaggcgattatatgcaatattacgaacggatgtataaaggacgcgaa
ctctaa
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