KEGG   Parabacteroides absconsus: NEE14_008965
Entry
NEE14_008965      CDS       T10821                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pabc  Parabacteroides absconsus
Pathway
pabc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pabc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NEE14_008965
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pabc03021]
    NEE14_008965
Transcription machinery [BR:pabc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NEE14_008965
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 HTH_23 Sigma70_r2 HTH_11 GerE Sigma70_ECF HTH_24 UPF0122 TnsD HTH_40 PF0610-like_N DUF1441 HTH_28 DUF2774 Mga HTH_10 PhyR_sigma-like HTH_38 HTH_5 wHTH_Par PurL_C
Other DBs
NCBI-ProteinID: WWV65169
UniProt: A0ABZ2ILU9
LinkDB
Position
complement(2056074..2056583)
AA seq 169 aa
MEKIAMDFEQEFKVLYRPLCLFALQYIPRIEDAEDIVQQAFTDVWEKLCEGVSILNMKAY
MYQTVKNRSLLLLTREKEELLDGNIPDEADDSSEEQIRIAERDARLWTAIDKLPPERRKI
FLLSKRDGLKYQEIADELHISVKTVENQISKALKSLRDTAIKIYTFFFG
NT seq 510 nt   +upstreamnt  +downstreamnt
atggagaaaatcgctatggatttcgagcaggaatttaaggtgctgtatcgtccgttatgc
ctttttgccttgcagtatataccgcggatcgaagacgcggaagatatcgtgcaacaggct
tttacggatgtttgggaaaaattatgtgaaggcgtttcaatattgaatatgaaagcctat
atgtatcagaccgtaaaaaaccgctcgttactcttgttgacacgggaaaaggaagagttg
ctggatggcaatatcccggatgaagcagacgattcgtctgaagaacaaatccggatagca
gagagagatgctcgtttgtggacggctattgataaacttcctccggaaagacggaaaata
ttcttgctgtccaagcgtgatggtttgaagtatcaggagatagcagacgaattacatatt
tctgtaaagactgttgaaaaccagatttccaaagcgttgaagtctttacgggatacagcc
ataaaaatatatacatttttctttggataa

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