Parabacteroides absconsus: NEE14_010140
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Entry
NEE14_010140 CDS
T10821
Name
(GenBank) RNA polymerase sigma-70 factor
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
pabc Parabacteroides absconsus
Pathway
pabc02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
pabc00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
NEE14_010140
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pabc03021
]
NEE14_010140
Transcription machinery [BR:
pabc03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
NEE14_010140
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_r4
Sigma70_ECF
GerE
HTH_11
PhyR_sigma-like
HTH_10
DUF8749
HTH_Tnp_ISL3
HTH_24
Motif
Other DBs
NCBI-ProteinID:
WWV65371
UniProt:
A0ABZ2IIM5
LinkDB
All DBs
Position
complement(2331035..2331577)
Genome browser
AA seq
180 aa
AA seq
DB search
MRKEDEDIILELLKGSDQKAFKRLFYYYAEPLRSFISYFIHDPESSEELVLDIFMSLWEN
RFSLKIHTSLKAYLFQSARNKVISYFRTKKEQCYLLEMPDFDLGQENETSFLEIKELSVL
IEEAVSLLPDRCRQIFLKSRIELLSNKELAEQMHISEKTVENQITIALKKIRKFLNEKYS
NT seq
543 nt
NT seq
+upstream
nt +downstream
nt
atgagaaaagaagatgaagacataattttagaattattgaaaggtagtgatcagaaagct
ttcaagcgcctgttttattactatgctgagcctctaagatcttttataagttattttata
catgatccagagtcttctgaagaattggtgttagatatttttatgtctttgtgggagaac
agattctctttaaaaattcacacaagtttaaaagcttatttgtttcaatctgcccggaat
aaggttatctcgtattttcggactaagaaagaacaatgttatttgttggaaatgccggat
tttgatcttggacaagagaatgagacttcttttttagaaataaaagaattatcagttttg
atagaagaagccgtctcattattacctgaccggtgtaggcaaatatttctaaaaagtagg
attgaattgttaagtaataaagagctggccgaacaaatgcatatttctgaaaaaacagtg
gaaaatcagataactattgcattaaagaaaatcaggaaatttctgaatgaaaaatattca
taa
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