KEGG   Parabacteroides absconsus: NEE14_010140
Entry
NEE14_010140      CDS       T10821                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pabc  Parabacteroides absconsus
Pathway
pabc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pabc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NEE14_010140
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pabc03021]
    NEE14_010140
Transcription machinery [BR:pabc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NEE14_010140
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF GerE HTH_11 PhyR_sigma-like HTH_10 DUF8749 HTH_Tnp_ISL3 HTH_24
Other DBs
NCBI-ProteinID: WWV65371
UniProt: A0ABZ2IIM5
LinkDB
Position
complement(2331035..2331577)
AA seq 180 aa
MRKEDEDIILELLKGSDQKAFKRLFYYYAEPLRSFISYFIHDPESSEELVLDIFMSLWEN
RFSLKIHTSLKAYLFQSARNKVISYFRTKKEQCYLLEMPDFDLGQENETSFLEIKELSVL
IEEAVSLLPDRCRQIFLKSRIELLSNKELAEQMHISEKTVENQITIALKKIRKFLNEKYS
NT seq 543 nt   +upstreamnt  +downstreamnt
atgagaaaagaagatgaagacataattttagaattattgaaaggtagtgatcagaaagct
ttcaagcgcctgttttattactatgctgagcctctaagatcttttataagttattttata
catgatccagagtcttctgaagaattggtgttagatatttttatgtctttgtgggagaac
agattctctttaaaaattcacacaagtttaaaagcttatttgtttcaatctgcccggaat
aaggttatctcgtattttcggactaagaaagaacaatgttatttgttggaaatgccggat
tttgatcttggacaagagaatgagacttcttttttagaaataaaagaattatcagttttg
atagaagaagccgtctcattattacctgaccggtgtaggcaaatatttctaaaaagtagg
attgaattgttaagtaataaagagctggccgaacaaatgcatatttctgaaaaaacagtg
gaaaatcagataactattgcattaaagaaaatcaggaaatttctgaatgaaaaatattca
taa

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