Parabacteroides absconsus: NEE14_010260
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Entry
NEE14_010260 CDS
T10821
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanine--D-glutamate ligase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
pabc Parabacteroides absconsus
Pathway
pabc00470
D-Amino acid metabolism
pabc00550
Peptidoglycan biosynthesis
pabc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pabc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NEE14_010260 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NEE14_010260 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pabc01011
]
NEE14_010260 (murD)
Enzymes [BR:
pabc01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
NEE14_010260 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
pabc01011
]
Precursor biosynthesis
Amino acid ligase
NEE14_010260 (murD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD_N
MurD-like_N
AlaDh_PNT_C
3HCDH_N
Motif
Other DBs
NCBI-ProteinID:
WWV65394
UniProt:
A0ABZ2IMK5
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Position
complement(2366642..2367979)
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AA seq
445 aa
AA seq
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MSKRIVVLGAGESGAGAAVLAKKEGFDVFVSDLSGIKPKYKELLDAHAICWEEGHHTESD
ILNADEVIKSPGIPDKAPIIQKLKAQETPIISEIEFAGRYTDAKMICITGSNGKTTTTLL
THHLLTEAGVDAGLAGNVGNSLALQVAENPHPVYVIELSSFQLDNMYNFKADIAILLNIT
PDHLDRYNYEMQNYVNAKFRIIQNQTEKDAFIFWNDDPIIAREIKKHNPKATLYPFAETH
EEGTKGYVENNQIIVESENGTFTMEQDLLALTGKHNLYNSLAATIAAKIMDIHDDKIRAS
LKNFAGVEHRLEKVARVRGVDYINDSKATNVNSCWYALQSMKTPVVLILGGTDKGNDYTE
IEALVKEKVRALIFLGVDNRKLHTFFDGKINQIEDAGSMEEAVNKAYRLAQKGDTVLLSP
CCASFDLFTCYEDRGDQFKACVRNL
NT seq
1338 nt
NT seq
+upstream
nt +downstream
nt
atgagtaagagaattgttgtattgggagctggagaaagtggcgcaggtgctgctgtcttg
gcaaaaaaggaaggttttgacgtttttgtatcagatctttctggtatcaagcccaaatat
aaggagctgctggatgcccatgccatttgctgggaagaaggacatcatacggagtctgac
atcttgaatgccgatgaagtgatcaagagcccgggaatcccggataaggctcctattatt
cagaaactgaaggcgcaggaaacaccgattatttcggaaattgaatttgcaggtcgttat
acagatgcgaagatgatatgtattactggcagtaatggaaaaacaacgacaacgttgttg
actcatcatttattgacagaagccggtgtggatgccggcctggctgggaatgtaggcaac
agcctggctctgcaggtcgcagaaaatcctcatccagtatatgtgatagagttaagcagt
ttccagttggataatatgtataattttaaggccgatattgctattctgctaaatataact
cctgatcatttggatcgttataactatgaaatgcagaattatgttaatgcaaagttccgt
ataatacagaatcagacggaaaaagatgctttcatcttttggaatgacgacccgattatt
gctagagaaatcaagaagcataatccgaaagctactctttacccttttgctgaaacgcat
gaagaaggcacaaaggggtatgtggaaaacaaccaaattattgtagaatcagaaaacgga
acttttacaatggaacaagatttattagcgttgacaggtaagcataatttgtataattca
ttagctgcaactatcgctgcgaagatcatggatattcatgatgataagatccgtgcttct
ttgaagaactttgcaggtgttgaacatcgtttagaaaaagttgcccgtgtgcgtggtgtg
gattatatcaatgattcaaaagcgacaaacgtcaattcttgttggtatgccttgcagtcg
atgaagactccggtcgttctgatcttaggtggtactgataaagggaacgactatacggaa
atagaagctttggtaaaagaaaaagtgcgggctttaattttcttgggggttgataaccgg
aagttgcacacattctttgatggtaagattaatcagatagaagatgctggttcaatggaa
gaagccgtgaataaagcttatcgtttggctcagaaaggtgatacggtactactctctcca
tgttgtgcaagcttcgatttgtttacttgttatgaagatcggggggatcagtttaaggcc
tgtgttcgtaatttataa
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