Parabacteroides absconsus: NEE14_010340
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Entry
NEE14_010340 CDS
T10821
Name
(GenBank) bifunctional UDP-N-acetylmuramoyl-tripeptide:D-alanyl-D-alanine ligase/alanine racemase
KO
K01798
Alr-MurF fusion protein [EC:
5.1.1.1
6.3.2.10
]
Organism
pabc Parabacteroides absconsus
Pathway
pabc00300
Lysine biosynthesis
pabc00470
D-Amino acid metabolism
pabc00550
Peptidoglycan biosynthesis
pabc01100
Metabolic pathways
pabc01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
pabc00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
NEE14_010340
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
NEE14_010340
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
NEE14_010340
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
NEE14_010340
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
pabc01011
]
NEE14_010340
Enzymes [BR:
pabc01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.1 Acting on amino acids and derivatives
5.1.1.1 alanine racemase
NEE14_010340
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
NEE14_010340
Peptidoglycan biosynthesis and degradation proteins [BR:
pabc01011
]
Precursor biosynthesis
Amino acid ligase
NEE14_010340
Racemase
NEE14_010340
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ala_racemase_N
Ala_racemase_C
Mur_ligase_M
Motif
Other DBs
NCBI-ProteinID:
WWV65409
UniProt:
A0ABZ2IML7
LinkDB
All DBs
Position
complement(2389302..2391773)
Genome browser
AA seq
823 aa
AA seq
DB search
MEYAIQDVAQIIGAKTNTLHDCTISILLTDSRRLSFPESSLFFALETKTNDGHRYIQDLY
KLRVRNFVVSKMLPEFAQMEEANFLLVKDVLAALQKLVAYHRKRFQIPVIGITGSNGKTV
VKEFLYQLLHNEFDIVRSPRSYNSQIGVPLSVWEMNEKNTLGIFEAGISQPDEMEKLQPI
IAPTIGVLTSIGEAHQENFISINQKCLEKLMLFNDSEAIIYDGDNPLISTLIESACLSHK
AIAWSRTDREAPLFIESIEKKQDETVIHCTLLGFDRTYTIPFVDDASIENVIHCLAVMLY
LKPTSVNDTEKFAHLEPVEMRLDVKEGIQGCLLINDTYNSDINSLDIALDFLQSRKVAKN
LKSTLILSDILQSGTLPKSLYKKVADLVERKKVNRLIGIGKDLKEFASVFGEQLEKSFYQ
TTDEFIASPEIKKFNNEVILLKGSRHFHFERISELLEKKVHETILEVNLSAIVHNFNFYR
SKLKPETKMVCMVKAFGYGSGSFELAKTLQEHRCDYLAVAVADEGAALRKEGITIPIIVM
NPEFSSFNTMFEYNLEPEVYSFRLLDAMIKETERRGIIAYPIHIKIDTGMHRLGFQPYEV
PQLIEHLKTQSGVKVRSVFSHLAGSDSFVFDDFTQQQLEKFKEAATSLENGLGHPVIKHI
LNTAGIERFPQWQMDMVRLGIGLYGVSASGINGLRTISKLKTTILQIQHVPAGDSIGYSR
RSYVERDSRIAIIPIGYADGLDRHFSNGHGEVVIRGKRCPIIGNICMDACMVDVTDTDAQ
EGDSVIVFGEELPVSELSDRLKTIPYEILTSVSPRVKRVYYWE
NT seq
2472 nt
NT seq
+upstream
nt +downstream
nt
atggaatacgcaatacaagacgtagcccagattatcggggctaaaaccaatacgttacat
gattgcacaattagtatattattaacagacagccggcgcttgtcgtttcctgagtcaagt
ctgttttttgcgttagaaacgaagacaaacgacggacaccgctatattcaggatttgtat
aagctgcgagtgcgaaattttgttgtcagcaagatgttgccggaatttgcgcaaatggaa
gaagccaacttcctgctggtaaaagatgtgctggctgccttacagaaactggtagcttat
caccggaaacgtttccagatcccggtcatcggtatcacgggaagcaacggaaaaaccgtt
gtgaaggaattcctctatcaattactgcacaatgaatttgatatcgtccgttctccgcga
agctacaattcacagatcggcgtacctctttcggtctgggaaatgaatgaaaagaatacg
ttaggtatcttcgaagcaggtatttcgcagcccgacgaaatggagaagttgcagccgatt
atcgcgccgaccattggtgtattgaccagtattggcgaagctcatcaggaaaactttatc
tcaatcaaccaaaagtgcctggagaagctgatgcttttcaatgatagcgaagccatcatc
tatgatggtgacaacccgttgatatcaacattaattgaatcggcctgcctctcacataag
gctattgcttggagccggaccgatcgcgaagcacccttgtttatcgagtcgatcgagaag
aaacaggatgaaactgtcattcattgtacgctgttgggcttcgaccggacctatacgatt
ccgtttgtcgatgatgcttctatcgagaatgtcattcactgcctggccgtcatgttgtac
ttaaagcctacaagcgtaaacgacactgaaaagtttgcacatctcgaaccggttgaaatg
cgtctggatgtaaaagaaggcattcaaggatgtctgctgatcaacgatacctataattca
gatattaattcactggatatcgccctcgatttcctgcaaagccggaaagtagccaagaat
ctgaaatcaaccttgattctttctgatattctgcagtcagggacgttgcccaagtcatta
tataagaaagtagcagatctggtagaacggaagaaagtcaaccgcttgatcggcatcgga
aaagacctgaaagagtttgcttcggtgtttggtgagcagctggagaaatcattctatcag
acaaccgacgagtttattgcttcacccgaaatcaagaagtttaacaacgaagttatcttg
ttgaaaggttcacgtcatttccacttcgaacggatctcagaactactggaaaagaaagta
catgaaacgatcttggaagtcaatctgtcggccattgttcacaacttcaacttctaccgg
tcgaaactgaaaccggagacgaagatggtctgcatggtaaaagccttcggatatggcagc
ggttcatttgaattagctaagacgttgcaggaacaccggtgtgattatttggcagtagct
gtggccgacgaaggagccgccttgcggaaagaaggtattaccattccaatcatcgttatg
aatccggaattcagcagtttcaataccatgtttgaatataatctggagcccgaagtatac
agtttccgtctgctggatgctatgatcaaggaaacagaacgtcgcggtattattgcttat
ccgatacatattaagatcgacactggtatgcaccgtttaggatttcagccttatgaagtt
cctcagctaatcgaacatctgaaaacgcaaagtggtgtcaaagtacgttcggttttctca
catctggcaggaagtgattccttcgtattcgacgactttacgcagcagcaactggaaaag
tttaaggaagcagccacttctctggaaaacggcttaggacatccggttatcaaacatatt
ctgaatacggccggaatcgaacggttcccgcaatggcagatggatatggtacgattaggt
atcggactatatggcgtaagtgcatctggtattaacggattaagaaccatcagtaagctg
aaaacgactattctgcagattcaacatgtaccagcaggcgattcaatcggatacagtcgc
cgaagttatgtagaacgagactcgcgaattgccatcataccaatcggatacgccgacgga
ttagaccggcatttcagtaatgggcacggagaagtagtaattcggggcaagcgttgtccg
atcattggtaatatctgtatggatgcttgtatggtagatgttactgataccgacgcgcag
gaaggcgatagtgtgatagtcttcggagaagaattgcctgtatccgaactctcagaccgg
ttgaagacaattccttatgaaatccttacatctgtttcacctcgtgtaaaacgggtttat
tattgggagtaa
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