Parabacteroides absconsus: NEE14_011045
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Entry
NEE14_011045 CDS
T10821
Name
(GenBank) sigma-54 dependent transcriptional regulator
Organism
pabc Parabacteroides absconsus
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
HTH_8
HTH_50
AAA
AAA_5
HTH_23
AAA_16
HTH_30
AAA_19
MCM
HTH_28
nSTAND3
HTH_20
ATPase
AAA_2
HTH_1
Motif
Other DBs
NCBI-ProteinID:
WWV65532
LinkDB
All DBs
Position
complement(2556982..2558352)
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AA seq
456 aa
AA seq
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MTDTKILVVDDDAVVRSSLTFLLKRAGYLPVTVDGPKDALRLVREEEFRLVLMDMNFTLT
TTGEEGIHLLKQVKVLRPDLPVILMTAWGSISLAVQGMQAGAFDFITKPWNNLVLLKAIR
NALDLYAPAEPATSESDAGRAHPCFDKIIGKSPALLSLLDTVARIAPTTASVLITGESGT
GKELIAEAVHTHSRRAKEPFVKVNLGGLSQSLFESEMFGHKKGAFTDAYMDRTGRFEMAD
KGTIFLDEIGDLELSSQVKLLRVLQDQTFEVLGDSRPRKVDVRVVSATNRDLSAMVREHT
FREDLFYRINLITVHLPALRERREDIPLLVRHFAQKLAETNGLPPVEFTSEAFTYLQQLP
FPGNIRELKNLVERTLLVSGRQRIDASDFEQFGMPQSSLSASTSLEGLTLEELERKSILQ
ALDKYEHNLSRTAEALGISRAALYRRLEKYGIKVCD
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgacagatactaaaattctggtagttgatgatgatgccgtggtacgttcttcgctgacg
ttcctgctgaagcgggccggttatctgccagtaacggtggatggaccgaaggacgcactt
cgtctggttcgcgaagaagaattccggttggtactgatggatatgaattttaccctgaca
acaaccggggaagaaggtatccatctgctgaaacaggtcaaagtgctgcgcccggatttg
ccggttatcctgatgacggcatggggctctatctctttggctgtacaaggcatgcaggcc
ggcgctttcgatttcatcacgaaaccatggaataatctggtattactgaaggcgatccgt
aatgctttggatttatatgcgccggcagaaccggcaacatcagaatcggatgccgggcgt
gctcatccgtgttttgataaaatcatagggaaaagtccggcgttgctaagcctgttggat
accgtggcgcgtattgctccgacaacagcctctgtcttgattaccggagaaagcggaacg
ggaaaggaactgattgccgaagccgtccatacacacagtcgccgggcaaaagagcctttt
gtgaaagtaaacttaggcggtctgtcgcaaagcctgttcgagagcgagatgttcggacat
aagaagggagcatttaccgatgcctacatggatcggaccggccgttttgagatggctgat
aaaggaacaatctttctggatgagatcggagacctggaattgtccagtcaggtgaagcta
ttgcgggtattgcaagaccagacctttgaggtgttgggcgatagtcgtccacggaaagtg
gatgtgcgggttgtcagtgctacgaatcgggatttgtcggctatggtacgcgaacatacg
ttccgtgaagatctgttctatcgtattaacctgatcaccgtccatttaccggctttgcgt
gaacggcgggaagatattccgcttttggtacgtcattttgcccaaaagctggcagagacg
aatggcctgccgccagttgaatttacttccgaagcatttacctatttgcagcaattgcct
ttcccgggtaatatccgcgagttgaagaatctggtagaacggacgttgttggtatccgga
cggcagcggatcgatgcttccgactttgagcagttcggaatgccgcaatcttctttatcc
gcttctacctcactggaaggattgacgcttgaagagctggagcgaaaaagtatcctccag
gctttggataaatatgaacacaacctgtcgcgaaccgctgaagccttaggcatcagtcgg
gctgcattgtatcggcgactggaaaaatatggcattaaggtatgcgattaa
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