KEGG   Parabacteroides absconsus: NEE14_011570
Entry
NEE14_011570      CDS       T10821                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
pabc  Parabacteroides absconsus
Pathway
pabc02020  Two-component system
Brite
KEGG Orthology (KO) [BR:pabc00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    NEE14_011570
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:pabc03021]
    NEE14_011570
Transcription machinery [BR:pabc03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     NEE14_011570
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r4 Sigma70_r2 Sigma70_ECF HTH_30 HTH_Tnp_ISL3 GerE HTH_AsnC-type HTH_23 DUF722 HTH_11 HTH_10 HTH_28 HTH_24 Trp_repressor wHTH_Par HTH_38
Other DBs
NCBI-ProteinID: WWV65631
UniProt: A0ABZ2IHX0
LinkDB
Position
complement(2699818..2700384)
AA seq 188 aa
MEWSCEEDIIRDLQHGDRKAYSFLFKKYYPLLCAYCSRFVSLEDAEEIVQDTLFWLWKSR
EEICINKSLGQYLLRTVYHKALNQIEHQKVQANAETIFYEQMQYLLHDTDYYQLEELKKV
MKQAIEALPPTYREAFVMHRFQQMSYKEIADQLHVSTKTVDYRIQQALKQLRADLKDYLP
LLVLLSLH
NT seq 567 nt   +upstreamnt  +downstreamnt
atggaatggagttgtgaagaagacatcatccgtgatctgcaacacggagacaggaaggct
tattcttttctgttcaagaaatattatcccttgctatgtgcctattgttcgcgttttgtt
tcactggaagatgctgaagagattgtacaagacaccttgttctggttatggaagagccgg
gaagagatctgtatcaacaagtcattggggcagtatctgctacggacggtttatcataaa
gccctgaatcagattgaacaccagaaggttcaggcaaatgccgaaactattttctacgaa
caaatgcaatacctgttgcatgacaccgattattatcagctggaagaactgaagaaagtg
atgaagcaggccattgaagcgctgccgcccacttatcgggaggcattcgtcatgcaccgc
ttccagcagatgagctataaggaaatagccgaccagctgcatgtctcaaccaaaacggta
gattaccgcatccagcaggccctaaaacaattacgggcagacctgaaggattatcttcca
ctacttgttttgttatcgttgcattaa

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