Parabacteroides absconsus: NEE14_011870
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Entry
NEE14_011870 CDS
T10821
Symbol
polA
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
pabc Parabacteroides absconsus
Pathway
pabc03030
DNA replication
pabc03410
Base excision repair
pabc03420
Nucleotide excision repair
pabc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pabc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NEE14_011870 (polA)
03410 Base excision repair
NEE14_011870 (polA)
03420 Nucleotide excision repair
NEE14_011870 (polA)
03440 Homologous recombination
NEE14_011870 (polA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pabc03032
]
NEE14_011870 (polA)
03400 DNA repair and recombination proteins [BR:
pabc03400
]
NEE14_011870 (polA)
Enzymes [BR:
pabc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NEE14_011870 (polA)
DNA replication proteins [BR:
pabc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
NEE14_011870 (polA)
DNA repair and recombination proteins [BR:
pabc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
NEE14_011870 (polA)
NER (nucleotide excision repair)
GGR (global genome repair) factors
NEE14_011870 (polA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
HHH_5
DNA_pol_lambd_f
HHH
Motif
Other DBs
NCBI-ProteinID:
WWV65689
LinkDB
All DBs
Position
2783440..2786208
Genome browser
AA seq
922 aa
AA seq
DB search
MKLFLIDAYALIYRSYYAFIKNPRINSKGVNTSAIFGFINTLEDILKREQPTHIAVAFDP
KGPTFRHEAFEQYKAQREETPEVIRQSVPVIKEIIQAYRIPILEVPYYEADDVIGTVAKQ
AASEGFEVYMMTPDKDYGQLVADHIYMYRPKFGGDYEVLGVPEVLEKYQLTSTAQVIDLL
GLMGDTADNIPGCPGVGEKTAQKLLAEFGSIENLLANTDKLKGAQKKKVEENVEQIRFSK
FLATIKTDVPITFDAAQCKRVAPDEDRLVELYTELEFKTFINRLKGESTASPATKEPAAA
VQFDLFATEPAVEPETSSLADIQTTPHSYYLADTAEKQIALCEQLLREKSFAFDTETEGL
DPLTAALVGMSFAIREQEAWYVPVPANREEATDIVLRLAPALQHPEIEKVGQNIKFDILA
LRKYGVRVKGPLFDTMIAHYLLNPELRHGMDYLAETYLKYKTVPIEDLIGPKGKKQASMR
TVPIEQIKEYAAEDADVTLRLKHYFAPLLKQEDVETLFFEMEMPLIYVLAEMEATGVKLD
TEALKQSSEVLSQQLIALEQSIYELAGQTFNINSTKQVGEILFDKLKLDEKAKKTKTGGY
STSEEVLEKIRGKHPIVGKLLEYRGIKKLLSTYIDALPALIHPETGKIHTSFNQAVTATG
RLSSTNPNLQNIPVRDELGREIRKAFIADDDDCIFFSADYSQIELRLMAHLSNDPHMVEA
FCSGADIHAATAAKIYGIPVEEVTSDMRRKAKTANFGIIYGISVFGLAERLGIPRAESKE
LIDGYFQTYPRVKEYMEESIRVAKEKGYVETLFKRKRFLPDINSHNAVVRGYAERNAINA
PIQGSAADIIKLAMIHIHQQFEAEHLKSRMILQVHDELNFNVRKEEFDRVKEIVLDCMEH
VLQLRVPLIADCGEGKNWLEAH
NT seq
2769 nt
NT seq
+upstream
nt +downstream
nt
atgaagctattccttatagatgcgtatgcattgatctatcgttcgtattatgcttttatt
aagaatccgagaatcaattcaaaaggtgtaaatacgtcggctatctttggctttatcaat
acgctggaagatattctgaagcgtgagcaacctacacatattgctgttgcttttgatccg
aaaggaccgactttccggcacgaagccttcgaacagtacaaggcgcagcgtgaagagacg
cccgaagttatccggcagtctgttcctgtcattaaggagattattcaggcctaccgtatt
ccgattctggaggttccttattatgaagccgacgatgtgatcggaacggtagctaaacag
gccgccagtgaaggctttgaggtgtatatgatgactcccgataaggattacggccagttg
gtggcagatcatatttatatgtatcgtccgaaatttggcggtgactatgaagtgctgggt
gttccggaagtgctggaaaagtatcagctgacatccacggcccaggtgattgatctgctc
ggtctgatgggcgatacggctgataatattccgggttgtcccggcgttggtgagaagacc
gcacagaagctgttagccgagtttggttcgatcgagaatctgttggcaaatacagataaa
ctgaaaggagcccagaagaagaaggtggaagagaatgtagagcagatccgtttctcgaag
ttcttggcaacgattaagacggatgtgccgattacatttgatgctgcccagtgtaaacgg
gtggcaccagacgaagatcgtttggttgagctgtacacggagttggaatttaagaccttt
atcaaccggttgaaaggtgaatcaacggcttctccagccacgaaggaaccggcggcagcc
gttcagtttgatctgtttgcgacagaaccagcagtcgagccggagacttcttctctggcc
gatatacagactacacctcactcctactacctggctgatacagcagagaaacaaatcgct
ttatgtgagcagctgttacgggaaaaatcgtttgctttcgatacagaaacggaaggtctg
gatccattgacggctgctttggtcggtatgtcttttgctattcgtgaacaggaagcttgg
tatgtcccggttccggcaaaccgcgaagaagctactgatatcgttcttcgcttggcgcca
gccttacagcatccggagattgaaaaggtcggccaaaatatcaagttcgatatcctggct
ttgcggaagtatggtgttcgggtgaaaggacctttatttgatacgatgatcgctcattat
ctgctgaatccggaattacgtcatggcatggattatctggcggagacttatctgaaatat
aagacggttccgattgaagatttaatcggtccgaaaggaaagaaacaggcctcaatgcga
acagttccgatcgagcagatcaaagaatatgccgccgaagacgcggatgtgacattgcgg
ctgaagcattactttgctccgttattgaagcaggaagacgtagaaacgttgttctttgag
atggaaatgcctttgatctatgtcctggctgaaatggaggcaacgggtgtaaaactggat
acagaagccttgaagcagtcatctgaagtcctgagccagcagctgatcgccctggagcag
tctatttatgaactggcgggccaaaccttcaacatcaattcgaccaaacaggtcggtgaa
atcttgtttgacaagctgaagctggatgaaaaggcgaagaaaaccaaaacaggcggttat
agtaccagcgaagaagtcttggaaaagatacggggaaaacatccgatcgtcggcaagttg
ttggaatatcgtggcatcaagaaactgctgagtacatatattgatgcgttgccggcgttg
atccatccagaaaccggaaagattcatacctcgttcaaccaggctgtaaccgctaccgga
cgtttgagttccaccaatccgaacttacagaatattccggtgcgggatgaattggggcgt
gagatccgcaaagcttttattgccgacgatgatgactgcattttcttctcggccgattat
tcgcagattgaattgcgtctgatggctcacctgagtaatgatccgcacatggtagaagcc
ttttgcagcggagcggatattcatgcggctacagctgccaagatttatggtattccggta
gaagaagtcaccagcgatatgcgccggaaagccaagactgccaatttcggtattatttat
ggaatctcggtctttggccttgccgagcgtttgggcattccgagggccgaatcaaaagag
ctaatcgatggctatttccaaacctatccgcgggtcaaagaatatatggaagaaagtatt
cgtgtggccaaagaaaaggggtatgttgaaaccttgttcaagcggaaacgctttttgccg
gatattaattcgcacaatgctgtcgtgcgtggttatgctgaacgaaatgcgatcaatgcg
cccattcagggaagtgcggccgatatcatcaagctggcgatgatccatattcatcagcag
tttgaagcggagcatctgaaaagccggatgattcttcaggtacatgatgaattgaatttt
aatgtccggaaagaagaattcgaccgtgtcaaggaaattgtattggattgtatggaacac
gtcctgcaacttcgcgtgcctttgatagccgattgcggtgaagggaaaaactggttggag
gctcattaa
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