Parabacteroides absconsus: NEE14_012785
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Entry
NEE14_012785 CDS
T10821
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pabc Parabacteroides absconsus
Brite
KEGG Orthology (KO) [BR:
pabc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pabc02000
]
NEE14_012785
Transporters [BR:
pabc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NEE14_012785
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
Motif
Other DBs
NCBI-ProteinID:
WWV65860
LinkDB
All DBs
Position
2997909..2999849
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AA seq
646 aa
AA seq
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MRKLVKKLYSTLSLSFIMSVALTSCSDFMDLTPEDQYDEATVWSDAGLVQAVVNDVYAYI
KHGADEVSTTALTDDAYFTHNYGVKAINESAISGSDLQWYDDDNCPFKWTNSYKGIYRAN
LILQNIDNVPEKVGYDLNMLKGETYFLRAYMYSELVRGFGGVPIVDKVYTIEEASTLSLP
RSSVKECLEFILSDLDKAIELLPETVSSADLGRATKGAAIALKARMCLHLASPLYADRTV
NTLACNQYDGDRTALYESALTYAKEVINSGLYSLVDCNAGTVKEIADKFHEIATTNNSEL
IFTKQFVNKSQNADNNVRNRAALCHGPNGYHNWAGVTPSNDLVMSFEMEDGSLNPAMRTA
GETTTVNPYLNREPRFYATIGYDGAEWGRARPSDSQVFDPTPLGTLQMGFYELSSGGSAV
EAQVAFDASGNPTKTISFMGVNGVDTRRSAVEDWNGSFTGYLEKKLIDTSFEASESMFQT
CPYPFIRLAEMYLIAAESCIELNRLDEATQYLDALRARIGRPDTKATLAVRNQAFNQDNL
REFLRLERRSELAYEDSRYYDIRRWMIAPQVMSKPLTGIAVVARLKPGKTASAPYVQDAE
TWDYQYFVTDLTYRETRKWTDKLYFAPIKRDEINRNTAIIQNPGME
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagttagtaaaaaaattatacagcacgctttcattaagcttcataatgtctgtt
gcactgacttcttgttcagattttatggatctgacgccagaggatcaatatgatgaagca
accgtatggtctgatgccggactggttcaggctgttgtgaatgatgtttatgcttatatt
aaacatggagcagatgaagttagtactacggcgctgaccgatgatgcttattttacacac
aactacggtgtgaaggctatcaatgaatcggctatttcaggtagtgacctgcagtggtat
gacgatgacaactgtcctttcaaatggacaaacagttataagggaatctatcgtgccaac
ctgattttacagaatattgataatgttcccgaaaaagtagggtatgatctgaatatgcta
aaaggcgaaacgtatttcttaagagcttatatgtattctgagctggtaagaggtttcggc
ggtgtacctattgtcgacaaagtttatacgattgaagaagcttctaccttgtcgttgcca
cgaagcagtgtcaaagaatgtctggaatttatactgtcggatctggataaggcaatagag
cttttgccagaaactgtctcttcagcagatcttggccgagcaacaaagggagcagcaatc
gccctgaaggcacgtatgtgtctgcacttggccagcccgttgtatgctgaccgtacagtc
aatacgctggcttgcaaccaatatgacggcgaccgtactgctttgtatgaatctgctttg
acttatgcgaaagaagttattaacagtggcctatattctttggttgactgtaatgcagga
acagtgaaggaaatagctgataagtttcatgaaattgctacaacaaacaattcggaattg
attttcacgaaacagtttgttaataagtctcagaatgcagataataatgtcagaaacaga
gctgctctctgccatggtcctaacgggtatcataattgggctggtgtgactccgtctaat
gatttggtgatgtctttcgaaatggaagatggttctttgaatccggctatgcggactgca
ggtgaaacgacaacggtaaacccgtatttgaatcgcgaaccgcgtttttatgctacaatc
ggttatgacggtgctgaatggggtagagctcgtccatctgattcgcaggtgtttgatcca
actcctttaggaaccttgcagatgggattctatgaattgtcaagtggaggtagtgctgta
gaagcccaggtcgcttttgacgcatctggtaacccgaccaagactatttctttcatgggt
gttaatggcgttgatacacgtcgctcggctgttgaagactggaatggttcttttacaggc
tatttggaaaagaagctgatcgatacttcatttgaagcatctgaatctatgttccagact
tgtccatatccgtttattcgtctggctgaaatgtacttgattgcagctgaatcttgtatc
gaattaaacagactggatgaagccactcagtatctggatgcattacgtgcccgtatcgga
cgcccagatacaaaagcaaccttggctgttcgtaaccaggctttcaatcaggataatctg
cgtgaattcttgcgtttggaacgccgttcagaattggcttatgaagattctcgttattat
gacatcagacgttggatgattgctcctcaggtgatgtcgaaaccgttgactggtattgct
gtggtagctcgtctaaaacctggaaagacggcttctgcaccgtatgttcaggatgctgag
acatgggattatcagtacttcgttaccgatctgacttatcgtgaaaccagaaagtggacg
gataagttgtattttgctcctattaagcgagatgaaattaatagaaatacagctattatt
cagaacccgggaatggaataa
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