Parabacteroides absconsus: NEE14_013090
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Entry
NEE14_013090 CDS
T10821
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
pabc Parabacteroides absconsus
Brite
KEGG Orthology (KO) [BR:
pabc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pabc03016
]
NEE14_013090
Enzymes [BR:
pabc01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
NEE14_013090
Transfer RNA biogenesis [BR:
pabc03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
NEE14_013090
Prokaryotic type
NEE14_013090
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Lactamase_B_2
Lactamase_B
Lactamase_B_4
Anti-Pycsar_Apyc1
Motif
Other DBs
NCBI-ProteinID:
WWV65919
LinkDB
All DBs
Position
complement(3084379..3085293)
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AA seq
304 aa
AA seq
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MADFELNILGCGSALPTTRHLASSQIIDLRDKLYMIDCGEGAQVQMRKMRIRFSRLNHIF
ISHMHGDHCFGLPGLISTLGMLGRNGDLFVHGPAELGDYLDSILKLFCQGLPFNVRFNPV
NTEEHTLVMEDRSVSVYSIPLKHRIPCCGYLFKEKQREPHIIREMIDFYQIPVKEIQYIK
QGADYVTPDGKCVPNHLLTRPAVPARSYAYCSDTAYRPEIIPYIHQVDLLYHEATFQETD
LPRAHETFHSTAKEAATIARDAEVKRLIIGHYSARYDDPQPLKQEAVAIFPNTTLAKEGM
KVNL
NT seq
915 nt
NT seq
+upstream
nt +downstream
nt
atggcagattttgaattaaacattttaggttgtggctccgctttgcctacaacccgccat
ttagcttcctcccaaattattgatctccgagataaattatatatgatcgactgcggagaa
ggtgctcaggtacaaatgcggaagatgcggatcaggttcagccgcctgaatcatatcttt
atctcgcacatgcacggagatcattgctttggcttgccgggattgatttccacattgggt
atgttaggaagaaacggcgacttatttgttcacggtccggccgaattaggagattattta
gattcgattctgaagctgttttgccagggacttccgtttaacgtccggtttaatccggta
aatacggaagagcatacgttagtgatggaagaccgctcggtttcggtctactctattcca
ctcaaacaccgcattccctgctgtggctatttatttaaggagaaacaacgcgaaccccat
attatccgagagatgatcgacttttatcagattccggtgaaggaaatccaatatatcaaa
caaggggcagattatgtgacgcccgacgggaaatgtgttccgaatcacctgctgactcgt
ccggcagtgccggcccgctcgtatgcctactgttcggatacggcttacaggccggagatt
attccctacatccatcaagtcgatttgctgtatcacgaagcaaccttccaggaaaccgat
ttaccacgggcgcacgagacatttcactcgacagccaaagaggcggctaccattgcccgt
gatgcggaagtcaaacgactgatcatcggacattactccgcccgttatgacgatccgcag
ccgctcaaacaagaagctgtcgccatctttcccaacaccacattggccaaagaaggaatg
aaagtgaatctgtaa
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