Parabacteroides absconsus: NEE14_013295
Help
Entry
NEE14_013295 CDS
T10821
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
pabc Parabacteroides absconsus
Pathway
pabc03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
pabc00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NEE14_013295 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
pabc03019
]
NEE14_013295 (pnp)
03016 Transfer RNA biogenesis [BR:
pabc03016
]
NEE14_013295 (pnp)
Enzymes [BR:
pabc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
NEE14_013295 (pnp)
Messenger RNA biogenesis [BR:
pabc03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
NEE14_013295 (pnp)
Transfer RNA biogenesis [BR:
pabc03016
]
Prokaryotic type
tRNA degradation factors
NEE14_013295 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
RNase_PH_C
S1
PNPase
KH_1
KH-I_KHDC4-BBP
RNase_II_C_S1
KH_KhpA-B
DUF1217
Motif
Other DBs
NCBI-ProteinID:
WWV65956
LinkDB
All DBs
Position
3140704..3142929
Genome browser
AA seq
741 aa
AA seq
DB search
MLNPINKTIELSDGRTITIETGKLAKQADGAVTVRMGNTVLLATVCAAKDANPGVDFMPL
QVEYKEKFSAFGRFPGGFTKREGKASDYEILTARLVDRALRPLFPDNYHAEVYVNIILFS
ADGEDMPDALAGLAASAALAVSDIPFNGPISEVRVARIDGQFVINPTFSQLEKADIDIMV
GATLDNIMMVEGEMNEVQESEMLDAIKAAHEAIKVQCQAQMELMEACGKTVKREYCHEVN
DDDLRKDVHDKCYAKAYAVATSGTDKHERADAFDAIVEEYKSQFTEEELTEEKVGMIDRY
YHDVEKEAMRRAILDEGKRLDGRKTTEIRPIWIETDCLPGPHGSAIFTRGETQSLSTVTL
GTKDDEKIIDDVLVHDKERFLLHYNFPPFSTGEAKAQRGVGRREIGHGHLAWRALKRMIP
ENYPYVVRVMSDILESNGSSSMATVCAGTLALRDAGVPMKKPVSGIAMGLISENHGTNYA
ILSDILGDEDHLGDMDFKVTGTKDGITATQMDIKVDGLSYEILEKALAQAREGRMYILDK
ILEAQPEARPDLKPHAPRIETLTVAKEFIGAIIGPGGKIIQGIQEKTGATISIEEVDGVG
KVEISASNKEVIDAAMRAIKSIVAVPEIGEVYEGKISSIMPYGAFVEFMPGKDGLLHISE
IDWKRLDTVEQAGLKEGDTITVKLLDIDPKTGKFKLSHKALLPKPEGYEERAPRSERAPR
SEKGPRNNNHGPRPDRQHNQG
NT seq
2226 nt
NT seq
+upstream
nt +downstream
nt
atgcttaatccaattaacaagacaatcgagttgagtgatggaagaaccatcaccatcgag
acgggaaaattggcaaaacaagccgacggcgctgtaaccgtccggatgggcaataccgta
ttgctggctactgtttgtgccgctaaagatgcaaatcccggggttgattttatgccactg
caagtagaatataaagagaaattctccgcttttggacgtttccctggcggctttaccaaa
cgtgaagggaaagcttctgattacgaaattttgacagcacgcttggttgaccgtgccttg
cgtcctttgttccccgacaattaccacgcagaagtttatgtaaatatcattttattctct
gctgatggagaagatatgccggatgcgctggctggtttggcagcatcagctgctttggca
gtttcagatattccgtttaacggaccgatttctgaagtacgtgttgcacgtattgatggt
cagttcgtcatcaacccgacgttctcgcagttggaaaaagcagatatcgatattatggta
ggtgctacgcttgataacatcatgatggtggaaggcgaaatgaacgaagttcaggagtcg
gaaatgctggatgcgatcaaggctgcacacgaagcaatcaaagtacagtgtcaggcgcag
atggaattaatggaagcctgcggcaaaacagtaaaacgtgaatactgccatgaagtaaat
gatgacgacttgcgcaaggatgttcacgataaatgttatgcgaaagcttatgctgttgct
acttcgggtaccgacaaacacgaacgtgctgatgcattcgatgcgatcgttgaagaatat
aaatctcagtttacggaagaagaactgactgaagagaaagtcggtatgatcgaccgttac
tatcatgatgtagaaaaagaagcaatgcgccgtgctatccttgatgaaggaaagcgtttg
gatggccgtaagacgacagagatccgtccgatctggattgaaaccgactgtctgcctggt
cctcatggttcagctatctttacacgtggtgagactcagtctttgtctacagttacatta
ggaaccaaagatgacgagaagattatcgacgatgtattggttcatgataaggaacgtttc
ttgttacattataacttccctccattctcaaccggtgaagcaaaggcacagcgaggtgtt
ggtcgtcgtgaaataggtcacggtcacttggcttggcgtgctttgaagcggatgattccg
gaaaactatccgtatgttgttcgtgttatgtcagatattctggaatcaaatggttcgtct
tctatggcaactgtctgcgctggaacattggctttgcgtgacgcaggtgttccgatgaag
aagccggtttcaggtattgccatgggattgatctctgaaaatcacggaaccaattacgcg
atcctgtcagatattctgggtgatgaagaccacttgggtgatatggacttcaaggtaact
ggaacaaaagatggtattactgctacgcagatggatatcaaagtagatggtctgtcatac
gaaattctggagaaggctttggctcaggctcgtgaaggccgtatgtatattctggataag
atactggaagcacagccggaagctcgtccagacttgaagcctcatgctccgcgtatcgaa
acattgacggtagctaaagaatttatcggtgctatcattggcccgggcggtaagattatt
cagggtattcaggaaaagaccggcgcaaccatctctattgaagaagttgacggtgtaggt
aaagtggaaatctctgccagcaacaaagaagtgatcgacgcggctatgcgtgctatcaag
tcgattgtggctgtaccggaaatcggcgaagtttacgaaggtaagatttcttctatcatg
ccttacggtgcattcgttgaattcatgccgggcaaagacggtttgctgcacatctctgaa
atcgactggaagcgtttggatacagttgagcaagccggtttgaaggaaggcgacacgatt
acggttaaactgcttgatattgatccgaaaacaggtaagttcaagttgtctcataaagct
cttctgccaaaaccggaaggatatgaagaaagagctccgagaagtgaacgcgcgcctcgt
tcggaaaaaggaccgcgtaataacaatcatggtccgcgtcctgatcgtcagcacaaccaa
ggttaa
DBGET
integrated database retrieval system
