Parabacteroides absconsus: NEE14_013405
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Entry
NEE14_013405 CDS
T10821
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
pabc Parabacteroides absconsus
Brite
KEGG Orthology (KO) [BR:
pabc00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
pabc02000
]
NEE14_013405
Transporters [BR:
pabc02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
NEE14_013405
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
TPR_19
Motif
Other DBs
NCBI-ProteinID:
WWV65977
LinkDB
All DBs
Position
complement(3172609..3174315)
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AA seq
568 aa
AA seq
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MKINNIKNCLLAGVSCLLLATSCDVDPTFYSQVVPDTYYTNSDAVWSRFNRPFTHWRWWV
AHNDTRIRLTELGTDEMCVPTRGNDWFDGAVYQNLHHHHFTDDLSPIKDGWDLITMGAAQ
AWSAKEDLELVDFEKVGLTEEDRTSMLNQLNVLVACFYLDGLDMFGGMPLYTSTKEDVKG
RSTDVETFNYVDSLLNVSLPNLPVKTVLGEQETNIIHQAVAAALKVRLYFNAEAFIGKPM
YEETAQLCQDIIDGKYGEYALANNFTEIFGWGNETCPEIIWTVPSENAKGETDGGLTAFT
LPYNFYQYLGGLQDAGGNNGLCLNPSRDPEGNLYNFKVGNPYETFNDKDLRKQLYVYEGG
KKYRGMFIVGRLQNPDFPNYQCLGGREYKGEVLNVVDQIAPLSRLGVDYNSYAEMPSTIA
DAEENSGVRVLKFSPLPNQDEYKERFNPDCPFIRLAEIYYTLAECKMRLGDKQGAADIIN
SIRKRNFEDGNDPDPVTAANLDKYRMLKEWMQEFIREGRRRTDLIRWGAYVTEDWWDHKA
TNDTKYNRYPLHYSSISANPLLEQNPGY
NT seq
1707 nt
NT seq
+upstream
nt +downstream
nt
atgaaaattaataacataaaaaattgtttgttggcaggagtttcttgtttactgttggct
acctcatgtgatgtagatccgacattctattcgcaagttgtgcctgatacttattataca
aactccgatgccgtttggtcacgattcaatcgtccgtttactcactggcgctggtgggta
gcccataacgatacacgtattcgtttaactgaattaggaacagacgaaatgtgcgttcct
acgagaggtaatgactggtttgacggtgccgtttatcagaacttgcatcatcatcatttt
acagatgacttgtcaccgattaaagatggctgggacctgattactatgggagcagcccag
gcttggagtgcaaaggaagacctggaacttgttgacttcgaaaaggttggtttgacagaa
gaagacagaacctccatgttaaatcagctgaatgtattggtagcttgtttctacttagac
ggacttgacatgttcggaggtatgccactatacacatcaacgaaagaagacgtgaaaggc
cgttcaactgatgtggaaacattcaactatgttgactctttgcttaatgtctctcttccc
aacttgccagtaaaaactgtcctgggagaacaagagacaaacattatccatcaggctgtt
gcagctgccttgaaagtacgtctatacttcaatgcagaagcattcatcggtaaacccatg
tatgaggagactgctcaattatgccaggatatcattgatggtaaatatggagaatatgca
ttagccaacaacttcactgaaatttttggttggggcaacgagacatgcccggaaatcatc
tggacagttccgagtgaaaatgcaaaaggtgaaactgatggtggtctgactgcttttact
ttaccttataacttctatcagtacttaggtggtctgcaggatgctggtggaaataatggt
ttatgcttgaacccaagccgtgatccggaaggtaatttgtataatttcaaagtaggtaat
ccgtatgaaacattcaacgacaaagaccttcgtaaacaactatatgtttatgaaggaggt
aaaaaatatcgtggaatgttcattgtcggaaggcttcagaatccagacttccccaactat
caatgcttaggaggtcgtgaatacaaaggagaagtactgaatgtagttgaccagatagct
cctctaagccgcttgggtgttgattacaacagctatgcagaaatgccttctactattgct
gatgcagaagagaactcaggtgtacgtgttttgaaattcagcccgctgcctaaccaagac
gaatacaaagaacgtttcaatccagactgtcctttcattcgtttagctgaaatctattac
acactagctgaatgcaaaatgcgtttaggtgacaaacaaggtgctgctgatatcatcaac
tctattcgtaaacgtaactttgaagacggtaatgatccggatcctgtaacagctgctaat
ttggataaataccgtatgttgaaagaatggatgcaggaattcatccgtgaaggtcgccgt
cgtaccgacttaatccgctggggtgcttatgttactgaagactggtgggatcataaagct
actaacgatacgaagtacaatcgttatccgcttcactactcaagcatcagtgcgaaccca
ttattggaacaaaatcctggttattaa
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