Parabacteroides absconsus: NEE14_013640
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Entry
NEE14_013640 CDS
T10821
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
pabc Parabacteroides absconsus
Pathway
pabc03030
DNA replication
pabc03430
Mismatch repair
pabc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
pabc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NEE14_013640 (dnaE)
03430 Mismatch repair
NEE14_013640 (dnaE)
03440 Homologous recombination
NEE14_013640 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
pabc03032
]
NEE14_013640 (dnaE)
03400 DNA repair and recombination proteins [BR:
pabc03400
]
NEE14_013640 (dnaE)
Enzymes [BR:
pabc01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NEE14_013640 (dnaE)
DNA replication proteins [BR:
pabc03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NEE14_013640 (dnaE)
DNA repair and recombination proteins [BR:
pabc03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NEE14_013640 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
HHH_3
CpsB_CapC
Phage_GP20
T2SSK
UBQLN1
DUF6282
Motif
Other DBs
NCBI-ProteinID:
WWV66021
LinkDB
All DBs
Position
3242998..3246798
Genome browser
AA seq
1266 aa
AA seq
DB search
MEPFIHLHVHTQYSLLDGQASIDALINKAYDDGMRAIAVTDHGNMFGIKEFFNKVNKKNG
KVQGTIKDLQKELKTLSAKEERTDEENARLAEIPGLLEKAKGDLFKPIIGCECYCARNHR
LQKTEKEDRSGWHLIVLAKNMTGYKNLIKIVSQSWTEGFYGRPRIDKELLEQHREGLIVC
SACLGGEIPQKIMHGNIHAAEDAVLWFKQMFGDDYYLEMQRHETHRADADQTVYKHQVEV
NKVLVELAHKHGIKVIATNDVHFVNEEDADAHDRLICLSTGKDLDDPNRMRYTKQEWMKT
TAEMNQIFSDIPDALRNTLEIADKVEFYSIDSGPIMPTFNIPEEFGTEEEYRKKLTEKDL
FDEFTRDENGNVVLSQEDAEAKIKKLGGYDKLYRIKLEADYLAKLTYEGAKPRYGDPLSD
EVKERLNFELHIMKTMGFPGYFLIVQDFIRAAREELGVSVGPGRGSAAGSAVAYCLGITK
IDPIKYDLLFERFLNPDRISLPDIDTDFDDDGRGEVLRWVTEKYGAERVAHIITYGTMAT
KSAIKDVARVEKVPLAESNRLAKLVPDKIPDMKKFKLKDAIEYVPELKEAANGPDPLVRD
TLKYAQMLEGNVRNTGVHACGVIIGRYDISDVVPVSTAKDKDTGEEMLVTQYEGSVIEET
GLIKMDFLGLKTLSIIKDAIENVRLTTGHDLDIDHISLEDPATYKLYCEGRTTGTFQFES
AGMQKYLKELQPSKFEDLIAMNALYRPGPMDYIPSFIARKQGKEEIKYDIPVMERYLKDT
YGITVYQEQVMLLSRLLANFTRGESDALRKAMGKKLIEKMNALKTKFLSGGKANGYEEAT
LNKIWADWEKFASYAFNKSHATCYSWVAYQTAYLKANYPSEYMAAVLSRSLSNIADITKF
MDECKAMGIQVLGPDVNESILKFSVDKQKNIRFGMGAIKGVGESAVQNIIEERKKNGPYK
DLFDFVERVNLSSCNKKNIESLALAGAFDNFHVQRESFFVDNGKGETFLDILVRYGNKYQ
TDKATAANSLFGDDNFVAIAKPEIPKAERWSDLERLNKEKELVGIYLSAHPLDEYRIILQ
YVCNTGMAELNDKESLVGREILAGGIVTGFREGTTKTGNPFGILKVEDFTGSGEIALFGQ
DYIEYSKYGKPGMYLLISGKMEARKYNDKIFDFRISSIKLLPNEKDKLIENIRITVPIHD
LDEPMINELSTLIKNNPGNSLLYFRVVDGSNNIALNLFSQKVKLKITKELIDYLTESETI
DFKING
NT seq
3801 nt
NT seq
+upstream
nt +downstream
nt
atggaaccctttattcatttacatgttcatacccaatattcgttgctcgacggacaagcc
tcgattgatgcgctgattaataaggcgtatgatgatggcatgcgtgctattgccgttacc
gatcatggtaatatgttcggcataaaagaattcttcaacaaggtaaataagaagaatggt
aaggtacaaggtacaatcaaagacttacaaaaggaactgaagacgctgagtgccaaagag
gaacggaccgatgaggaaaacgcccggttggcagaaatcccgggcttgttggaaaaggca
aagggtgatctgttcaagccgattatcggatgtgaatgttattgcgcccggaatcatcgt
ctccagaagacggaaaaggaagaccgaagcggatggcacttgattgttcttgccaagaat
atgacgggatataagaatctgatcaagattgtttcccaatcatggacggagggtttctac
ggacgtccgcgtattgacaaggaattgttggaacagcatcgagaagggttgattgtctgt
tctgcttgtctgggtggagagattccgcagaagatcatgcacggaaatatccatgctgcc
gaagatgccgtgctgtggttcaagcagatgtttggagacgattattatttggagatgcaa
cgtcatgagacgcatcgggcagatgccgaccagacggtatataaacatcaggtggaagtc
aataaagtcttggttgaacttgcccataaacatggaataaaggtcatagctacgaatgat
gtgcattttgtgaacgaagaagatgctgatgcgcacgatcgtctgatctgcttgagtacg
ggaaaggacctggatgatccgaaccgtatgcgttatacaaagcaggaatggatgaagaca
actgccgagatgaatcagatcttcagcgatattccggatgctttacgtaatacgctggaa
atagcggataaggttgaattctatagtattgacagcggaccgattatgccgaccttcaac
attcctgaagaattcggtacggaggaagagtatcgtaagaaactgacagagaaagatctg
ttcgacgagttcacaagggatgaaaacggaaatgttgtcttgagccaggaagacgcggaa
gcaaagatcaagaaattgggcggatacgacaagttataccgtatcaagctggaagcagat
tatctggccaagctgacgtatgaaggagcaaagcctcgctatggtgatccattgtcggac
gaagtcaaggaacgtttgaacttcgagttgcatatcatgaagacgatgggtttcccgggt
tacttcttgattgtacaggatttcatccgggctgcccgggaagaattgggcgtttcggta
ggaccgggccgtggttctgctgcgggttctgctgtagcttattgtttgggaattaccaag
atcgacccgattaaatacgatttgctgttcgagcgtttcctgaatccggaccgtatctct
ttgcctgatattgataccgacttcgatgatgacggacgtggcgaagtacttcgctgggta
acggagaaatatggtgcggaacgtgtggcacatattattacgtatggtacgatggctacg
aagtcggctatcaaggatgtggcgagagttgagaaagttccgttggccgaatccaaccgg
ttggctaaactggtgcccgataaaatcccggatatgaagaaattcaagctcaaggatgcc
attgaatatgtaccggagttgaaagaagctgccaatggtccggatccgttggttcgggat
accttaaaatatgcccagatgctggaaggtaatgttcgtaataccggcgttcatgcttgt
ggtgtgatcatcgggcggtatgatatatcggatgttgtaccggtcagtacggcgaaagac
aaagatacgggcgaagaaatgctggtaacgcagtatgaaggttcggtgattgaggaaact
ggtctgatcaagatggacttcttgggactgaagacactttctatcatcaaagatgccatc
gagaatgtccggttaacgacggggcatgacttggatatcgaccacatcagtctggaagat
ccggctacttataaactgtattgcgaaggacgaacgaccggaacattccagtttgaatcg
gctggtatgcagaaatacctgaaggaactgcaaccctctaagtttgaagacttgattgcc
atgaatgctttgtatcgtccgggacctatggattatatcccttcttttatcgcccgtaag
cagggaaaggaagaaatcaagtacgatattccggtcatggagcgttatttgaaggatacg
tatggtattacggtctatcaggagcaggtcatgttgctctcccgtctgcttgctaacttt
acccgtggtgaaagtgatgccctccgaaaggcaatgggaaagaaactgattgagaagatg
aatgccttgaagaccaaattcttgtcgggtggaaaagccaatgggtatgaagaggcgaca
ttgaacaagatttgggccgattgggaaaagtttgcttcctatgctttcaataagagtcac
gctacgtgttattcgtgggtggcttatcagacagcttatctgaaagccaactatccgtcg
gaatatatggctgccgtattgagccgaagcttatcgaacattgccgatattactaagttt
atggacgaatgtaaggcgatgggaatacaagtattaggcccggatgtcaatgaatctatt
ctgaagtttagcgtagataagcaaaagaacatccgttttggtatgggcgcaatcaaaggt
gttggtgaatcggctgttcagaatattatagaagaacggaagaaaaatggtccgtataaa
gacttgttcgatttcgtagaacgtgttaatctctcatcctgcaacaagaagaatatcgaa
tcgttagctttggccggcgctttcgataacttccatgtacagcgggaatcgttctttgta
gataatgggaaaggcgagacgttcctcgatatcctggtccgctatggtaataaataccag
acggacaaggcaacggcggctaactccttgtttggagatgataactttgtcgccatcgcc
aaacccgaaatcccgaaggccgagcgatggagtgatctggaacgcctgaacaaggaaaag
gagcttgtcggcatttatctgtcggctcatccgctggatgaatatcgtatcatcctgcaa
tatgtctgcaatacaggcatggccgagctgaacgataaggaaagtctggttggccgagaa
atattggccggcggtattgttaccggtttccgtgaaggaactaccaagaccggtaatcca
ttcggtattctgaaggtggaagattttaccggaagtggggaaattgccttgtttggtcag
gattatatcgaatacagtaagtatggaaaaccgggcatgtatttgttgatcagtggaaag
atggaagcccgtaagtataacgacaagatctttgatttccggatctcgtcgattaagtta
ttaccgaacgagaaagataagttgattgagaatattcgtattacggttcctatccatgat
ttggatgaaccgatgattaatgagttgtcaaccctgatcaagaacaatccgggaaatagt
ttgttatattttcgggtggtagacggaagcaataatattgcgctgaatctgttctctcag
aaggtgaagttgaagattaccaaagagctgattgattacctgaccgagagtgaaaccatc
gactttaaaattaacggctaa
DBGET
integrated database retrieval system
