Parabacteroides absconsus: NEE14_013895
Help
Entry
NEE14_013895 CDS
T10821
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
pabc Parabacteroides absconsus
Pathway
pabc00450
Selenocompound metabolism
pabc01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
pabc00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
NEE14_013895
Enzymes [BR:
pabc01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
NEE14_013895
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
NEE14_013895
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Aminotran_1_2
Cys_Met_Meta_PP
Beta_elim_lyase
SepSecS
DegT_DnrJ_EryC1
SelA
Pyridoxal_deC
Motif
Other DBs
NCBI-ProteinID:
WWV66069
LinkDB
All DBs
Position
3309798..3311015
Genome browser
AA seq
405 aa
AA seq
DB search
MTFDIKAIREDFPILSHQVYNKPLVYFDNAATTQKPRCVVEKIENGYYNVNANIHRGVHF
LSQEATEAHEEARRTVQHFLNARSSNEIVFTRGTTESINLVASSFTDECMSAGDEVIVSV
MEHHSNIVPWQIQAAKKGISLRVIPMNEKGELLLDEYRKLFTEKTRLVAVTQVSNVLGTV
NPIKEIVAIAHEHGVPVLVDGAQSTPHMKVDVQDLDAEFFVFSGHKIYGPTGIGVLYGKE
EWLDKLPPYQGGGEMIATVSFEKTVFNELPFKFEAGTPDYIGSVALAEALRYVDNIGMDR
IAAQEQDLLQYATEQLKQIEGMRIFGEAADKGAVISFLVGNIHHYDMGMLLDHLGIAVRT
GHHCAQPLMQALGIEGTVRASFSFYNTREEVDVLVRGIERVRKMF
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgactttcgatataaaagctatacgggaagatttcccgatcctttctcatcaggtttac
aacaagcctctggtttatttcgataatgcggcaacgacacaaaaaccgcgttgtgtggtc
gaaaagattgaaaacggatattataatgtgaacgcgaatattcatcgtggtgtacacttc
ctgagccaggaagcaaccgaagcgcacgaagaagcccgccgtacggtacaacatttcctg
aatgcccgttcatctaatgagattgtctttacacggggaacgacagaatccatcaattta
gtagccagcagttttaccgacgaatgtatgtcggccggagatgaggtgattgtttcggtc
atggagcaccattccaatattgttccctggcaaatccaggcagcgaagaaaggtatttcc
ctgcgggttatcccgatgaacgagaaaggagaactgctgctggatgaataccggaaactt
ttcacggagaagacccgtctggtcgctgtaacgcaagtatcaaatgttttgggaacagtc
aatccgataaaggaaatagttgcgatagcccacgaacacggagttcctgtgctggttgac
ggtgcgcaatctactccgcatatgaaagtagatgtgcaagacctggatgctgaattcttt
gttttctcagggcataagatttacggtccgaccggcattggtgtactgtatggaaaagaa
gaatggctggataaacttcctccttatcagggcggtggtgaaatgattgccacagtatca
ttcgaaaagaccgtattcaatgaattaccatttaagtttgaagccggcacgccggattat
attggcagtgttgctttggccgaggctttgcgttatgttgataatatcggtatggaccgc
atagcagcgcaggaacaggatttactccagtatgctaccgaacagctgaaacagatcgaa
ggcatgcgtatcttcggtgaggcggctgataaaggcgccgttatttctttcctggtcgga
aatatccatcactatgacatgggcatgctgcttgaccatctgggcattgccgtgcgtacg
ggtcatcattgtgcacagcctttgatgcaggctttgggaatagaagggacagttcgtgct
tcgttctcattctataatacgcgtgaagaagtagatgtgctggttcgtggtatcgaacga
gtacgtaaaatgttctga
DBGET
integrated database retrieval system
