Parabacteroides absconsus: NEE14_015090
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Entry
NEE14_015090 CDS
T10821
Name
(GenBank) DEAD/DEAH box helicase
Organism
pabc Parabacteroides absconsus
SSDB
Ortholog
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Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
ResIII
Helicase_C
DEAD
DEAD_2
SWI2_SNF2
Motif
Other DBs
NCBI-ProteinID:
WWV66275
LinkDB
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Position
complement(3561446..3563407)
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AA seq
653 aa
AA seq
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MADTGVLLIKSLDKGFVIHGDTIKILQNRFAMMYLRRNLHHSVSGADIVIEDVTDINTIM
SHVSVLAKYGKCEIHFDENVSEEIKAYEDREQSFAEFSKKAKDIRENHPVVSEFEDFKES
LIKNMQARRLYTLQMLSAYHMAFAQNACNFSVPGAGKTSIVYGAYAYLKHLPESNPKHVD
KLLIIGPLSSFGPWEHEYQECFGRKVESMRLIGGLSKEKKSLYLHGIDTCELTIASYQSV
ISIKDDLCFFLSRNKVMVVLDEAHKIKNTQGAITAASTMELAKLATSRVVLTGTPAPNGY
EDLYNLFKFIWPDRDIISYNVAQLSNMSANSDDNRIPDLIERISPFFIRIKKSDLNIPPA
TYKEIPVPMSDTQRIVYDTIENKLMQSFDEDNDSPYLKKIRQAKMIRLMQAATNPELLRH
SFNGAFDEDGNPIVESKEDSIFIGNILQFVGNEMPNKFIKACEIVKDIISQGGKVVIWAS
FIRNIEKMSQCLSDMGIPSKSLYGVTPVETADDEFESQMETREFIVREFNSDNSSFNVII
ANPSAVAESISLHKKCHNAIYLERSFNAAHFIQSKDRIHRYGLPEDTITTYYYLISENSI
DETINSRLQLKEKRLNQIMESMPIPLFDNNLEEGGIDDIKAIIYDYAQRAKKI
NT seq
1962 nt
NT seq
+upstream
nt +downstream
nt
atggctgatacaggagttttgttaataaaatccttggacaagggatttgtgatacatggt
gatactataaaaattttacagaatcgctttgctatgatgtatttacgtcgaaatctacat
cattcagtttctggagcagatattgtcattgaagacgtgacggatattaataccatcatg
tctcatgtatctgtactagcaaaatacggaaaatgtgagattcatttcgatgaaaatgta
agcgaagagataaaagcatatgaagatagggaacagagctttgcggagttctccaagaag
gctaaagacattcgagagaaccatcctgttgtttctgaatttgaagacttcaaagaatcg
ttaataaaaaatatgcaggcacgtcgtttatataccttacagatgctatctgcttaccat
atggcgtttgcacaaaacgcctgtaatttttctgtccctggagctggtaaaacaagtatc
gtatatggtgcctacgcttatttgaaacatttacctgagtctaatcccaagcacgtcgat
aaactgcttataattggtcctcttagttcgtttggtccatgggaacatgaatatcaggaa
tgtttcggtagaaaggttgagtctatgagattgattggcggcctttctaaggaaaagaaa
tcgttgtatttacatggaattgatacatgtgaattaacgattgcatcatatcagtcggtt
atctcgatcaaagatgatctttgtttcttcttatcacgtaacaaagtgatggttgtactt
gatgaagcgcataaaataaaaaacactcaaggagcaataaccgctgcatctactatggag
ttggcaaaacttgctacgtcccgagttgtccttaccggtacacccgctcccaatggctat
gaagacttgtataatctgttcaaatttatctggccagacagagatattatctcatataat
gttgcacagctttctaatatgtcagccaattcggatgataaccgaataccggatttgatt
gagagaatatcacctttcttcattcggataaagaagagcgacttaaacattcctcctgca
acttataaggaaataccggttcctatgtctgatactcagaggattgtttatgatacgata
gagaacaaacttatgcaatcttttgatgaagacaatgattctccttatctgaaaaaaatt
cgccaagctaaaatgattcgtctcatgcaggctgccacaaacccagagctattaagacac
tcttttaatggcgcatttgatgaggatggaaatcccatagtagaatcgaaagaagatagc
atcttcattggcaatatcctccaatttgtgggtaatgagatgccaaataagtttatcaaa
gcttgtgagattgttaaagatatcatttctcaaggtgggaaagtggtcatttgggcatca
tttatacgcaatattgagaaaatgagtcaatgtttaagcgacatgggaattccttctaag
tctttgtatggagtcactcctgtcgaaaccgctgatgacgagtttgaaagtcagatggaa
acaagagaatttatagtgagagaattcaattcggacaactcgtcttttaacgttatcata
gcaaacccatctgctgtcgctgaatctatttctttgcataagaaatgtcataatgcaata
tacctagaaagatcttttaacgcagctcatttcatccaatctaaagatagaattcatcga
tatgggttgcctgaagatacaatcactacatattactatttgatttcagagaattcaatt
gatgaaacaataaattccaggcttcagttaaaggagaaacgattaaatcaaataatggag
agtatgcctattcctttatttgataacaatttggaggaaggtggaattgatgatataaag
gctattatttacgattatgcgcaaagagctaaaaagatatag
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