Parabacteroides absconsus: NEE14_015245
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Entry
NEE14_015245 CDS
T10821
Symbol
truA
Name
(GenBank) tRNA pseudouridine(38-40) synthase TruA
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
pabc Parabacteroides absconsus
Brite
KEGG Orthology (KO) [BR:
pabc00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pabc03016
]
NEE14_015245 (truA)
Enzymes [BR:
pabc01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
NEE14_015245 (truA)
Transfer RNA biogenesis [BR:
pabc03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
NEE14_015245 (truA)
Prokaryotic type
NEE14_015245 (truA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
WWV66305
UniProt:
A0ABZ2IJS9
LinkDB
All DBs
Position
3603101..3603853
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AA seq
250 aa
AA seq
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MKRYFIYLGYNGKSFCGWQIQPNGMTVQQCIEEALSTILRQPVSIVGAGRTDAGVHARLM
VAHFDWAETLPDPAFLTDKLNRLLPKDIVIYRIVPVIPEAHARFDATSRTYQYYLTMQKD
PFRYDLVYRYLGKLDFDRMNEACRVLFDYVDFTSFSKLHTDVKTNNCRIYEAGWKQEGDL
WVFTIRADRFLRNMVRAIVGTLLEVGRGKMSVEGFRRVIEAKDRGKAGTSAPGHALFLVN
VTYPDRLFEV
NT seq
753 nt
NT seq
+upstream
nt +downstream
nt
gtgaagagatactttatttatttaggatataacggcaaatccttttgcggatggcagata
cagccgaacggcatgaccgtacagcaatgtattgaagaggctctttcgaccatccttcgc
cagccggtttcgattgtgggtgccggacggacggatgccggcgtacatgcccgcctgatg
gtggcccattttgactgggcggagaccttgcccgacccggcttttctgaccgacaagctg
aaccgcctgttgccgaaagacattgtgatctaccggattgtcccggtgattccggaggca
catgcccgttttgatgccacatcccgaacctatcagtattacctgacgatgcagaaagac
cctttccgctatgacctggtgtaccgttatctggggaaactggacttcgaccgtatgaac
gaggcctgccgggtgctgttcgactatgtggattttaccagcttcagcaagttgcacacc
gatgtcaagaccaacaattgccgtatttacgaggccggctggaagcaggaaggcgatttg
tgggtcttcacgatccgggccgaccgtttcttgcggaatatggtgcgtgccattgtggga
accctgctggaagtggggcgcggcaagatgtcggtagaaggtttccgccgggtgatcgag
gccaaagaccggggaaaagccggcacatcggctccgggccatgccttgtttttggtgaat
gtcacttatcccgaccggttgtttgaggtgtaa
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