Parabacteroides absconsus: NEE14_015625
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Entry
NEE14_015625 CDS
T10821
Symbol
gcvP
Name
(GenBank) aminomethyl-transferring glycine dehydrogenase
KO
K00281
glycine cleavage system P protein (glycine dehydrogenase) [EC:
1.4.4.2
]
Organism
pabc Parabacteroides absconsus
Pathway
pabc00260
Glycine, serine and threonine metabolism
pabc00630
Glyoxylate and dicarboxylate metabolism
pabc00670
One carbon pool by folate
pabc00785
Lipoic acid metabolism
pabc01100
Metabolic pathways
pabc01110
Biosynthesis of secondary metabolites
pabc01200
Carbon metabolism
Module
pabc_M00621
Glycine cleavage system
Brite
KEGG Orthology (KO) [BR:
pabc00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
NEE14_015625 (gcvP)
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
NEE14_015625 (gcvP)
09108 Metabolism of cofactors and vitamins
00785 Lipoic acid metabolism
NEE14_015625 (gcvP)
00670 One carbon pool by folate
NEE14_015625 (gcvP)
Enzymes [BR:
pabc01000
]
1. Oxidoreductases
1.4 Acting on the CH-NH2 group of donors
1.4.4 With a disulfide as acceptor
1.4.4.2 glycine dehydrogenase (aminomethyl-transferring)
NEE14_015625 (gcvP)
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GFIT
Motif
Pfam:
GDC-P
GcvP2_C
Aminotran_5
Beta_elim_lyase
Motif
Other DBs
NCBI-ProteinID:
WWV66373
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Position
complement(3708887..3711739)
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AA seq
950 aa
AA seq
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MDTTKFVNRHVGITAEDLPDMLKAVGVNTLDELIDQTIPANIRLKQPLNLPEPMTEREFA
EHINELASKNEVFTSYIGMGWYDTICPAPIQRNVFENPVWYTSYTPYQAEVSQGRLEALL
NFQTVICDLTGLPLANCSLLDEATAAAEAATMFFGARSRAQIKAGANVIFVDEKVFASTQ
AVIHTRAIPQGMKIVTGDYKTFAFTPEVFGAIVQYPNADGSIEDYQEFINRAHANGTKVA
VAADLMSLVLLTPPGEWGADVVFGSSQRFGIPMFYGGPSAAYFATKDEYKRAIPGRIIGI
SKDAYGHPAYRLALQTREQHIKREKATSNICTAQALLATMAGFYAVYHGAEGLKNIAGRI
HATAGFVAKELEKLGYKQLNKDFFDTLKIELPANVSIEALREIALECKVNLRYFDSGLVG
ISIDETTQPTDVGVLMYIFSGAAGKDYMLQEAIPCQTYFDPKFARTSAFLQEDVFKKYHT
ETELMRYITRLGRKDISLAQSMISLGSCTMKLNPASTMLPLSLAQFQNIHPYAPEDQVEG
YKELIENLSSYLCEITGFKGCTLQPNSGAAGEYTGLRVIRAYLESIGQGHRNIVLLPASA
HGTNPASAIQCGFTTVTVKCDENGNIDLEDFRAKAEANKDNLAASMITYPSTHGIFEADI
KEMCEIVHACGGQLYMDGANMNAQVGLTNPGTIGADVCHLNLHKTFSSPHGGGGPGVGPI
CVAEHLVPFLPQHPVLFGSDLNTVAAAPYGSAGILPITYGYIRMLGTEGLTMATKIAILN
ANYLAAKFKDTYGVVYTGTTGRVGHELILECRTVKERTGIDESDIAKRLMDFGYHAPTLS
FPVHGTLMVEPTESESKAELDRFVEVMECIWNEIKEVENGEADKVDNVLKNAPHPEYEVT
ANEWDHSYPRSKAAFPLEWLHDSKFWINVARVDNAYGDRNLVPTICNCQI
NT seq
2853 nt
NT seq
+upstream
nt +downstream
nt
atggatacaactaaatttgttaatcgccatgtaggtatcacagcggaagatcttccagat
atgctgaaagctgttggtgtgaatacacttgacgagctgattgaccagactattccggcc
aacatacgtttgaagcagccgttgaacctgcccgaacccatgacagaacgcgaattcgct
gaacatattaacgaattagcttcaaagaatgaagtttttacttcttatattggaatgggt
tggtatgatactatttgtccggcacctattcaacgcaacgtatttgagaatccggtttgg
tacacgtcttatacaccgtatcaagctgaagtttcacaaggcagattggaagccttactg
aatttccagacagttatctgtgatctgacaggtcttcctttggctaactgttctttgctt
gacgaagctactgctgcagccgaagctgcaaccatgttcttcggagctcgcagtcgtgct
caaatcaaggctggagctaatgttatattcgtagacgaaaaggtatttgcctctacacag
gcagttatccatactcgtgctattccacagggaatgaagattgtgacaggcgactataag
acatttgctttcactccggaagttttcggagctattgtacagtacccgaatgcagatggt
tcaatagaagactatcaggaattcatcaatcgcgcacatgctaacggcacaaaagtagct
gttgcagcagacctaatgagtctggtattattgactcctccgggagaatggggcgccgac
gtcgtattcggaagcagccagcgttttggtatcccaatgttctacggcggaccatcagca
gcatactttgcaacaaaagatgaatataaacgtgcgattccgggacgtatcatcggtatc
tcaaaagatgcttacggccatccggcttaccgtttggcactgcaaacccgtgaacagcat
atcaaacgtgagaaagcaacatccaatatttgtacagcacaggctttattggcaacaatg
gccggattctatgctgtttaccacggagcagaaggattgaagaacattgccggccgcatt
catgcaacagccggtttcgtagctaaagagctggagaaattaggatacaaacaattgaac
aaagatttcttcgatacgctgaagattgaattaccagccaatgtatctattgaagcattg
cgtgaaattgctttggaatgcaaagtcaacctgcgttacttcgacagcggtctggttgga
atcagtattgatgaaacaactcaaccaacagatgttggtgtcctgatgtacatcttctcg
ggtgcagccggcaaagattatatgttacaggaagccattccgtgccagacttattttgat
ccgaagtttgcccgtacatcagccttcctgcaagaagacgtcttcaagaaatatcatacc
gaaacagaactgatgcgttatatcactcgtttgggaagaaaggatatttctctggctcag
tcgatgatttctttaggttcatgtaccatgaagttaaatccggcttcaaccatgctgcct
ctgagtttggctcaattccagaatattcacccgtatgcaccggaagatcaagtggaaggt
tataaggaactgatcgaaaacttatcttcttatctttgtgaaataacaggatttaaggga
tgcactttacaacctaattcaggagctgctggcgaatacacgggtttacgcgtaatccgt
gcttatctggaaagcatcggtcaaggtcatcgaaacattgttctgctgccggcttcagcc
cacggaacgaacccggccagtgctatccaatgtggatttacaacagttaccgtaaaatgt
gatgaaaacggaaacattgatctggaagatttccgggcaaaagcggaagccaacaaagac
aatctggcagccagcatgattacttatccgtctactcacggtatcttcgaagcggatatc
aaggaaatgtgtgagattgttcacgcctgcggcggacaattatacatggatggagccaat
atgaatgcgcaagtcggattaactaatccgggaacaatcggtgcggatgtttgccacttg
aacctgcataagacattctcttctcctcacggtggtggcggtcctggcgtaggtccgatc
tgtgtagcagaacatctggttccattcttgcctcaacatccggttctgtttggaagcgac
ctgaatacagttgcagctgctccttatggtagtgcaggtattcttcctattacatacgga
tacattcgtatgttaggaactgaaggattaacaatggctaccaagattgccattttgaat
gctaattatttagcagctaagtttaaagatacatacggagttgtctatactggaacaaca
ggacgtgtaggccatgaactaattctcgaatgccgtaccgttaaagaacgcacaggaatt
gatgaaagtgatattgccaagcgtctgatggacttcggttaccatgctcctactctttct
ttcccagtccatggaacattgatggtcgaaccgactgaaagtgaaagtaaagctgaactg
gatcgctttgtagaagttatggaatgtatctggaacgaaatcaaggaagttgaaaatgga
gaagccgacaaggttgataatgtactgaagaacgctccgcatccggaatatgaagttact
gctaacgaatgggatcacagctatccacgcagtaaagctgcattcccactcgaatggcta
cacgacagcaagttctggatcaatgtggcccgtgtcgacaatgcttatggagaccgtaac
ttggttccaacaatctgcaattgccagatttaa
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