Pyrodictium abyssi: PABY_01860
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Entry
PABY_01860 CDS
T09712
Name
(GenBank) transcription elongation factor Spt5
KO
K15172
transcription elongation factor SPT5
Organism
pabi
Pyrodictium abyssi
Brite
KEGG Orthology (KO) [BR:
pabi00001
]
09120 Genetic Information Processing
09125 Information processing in viruses
03250 Viral life cycle - HIV-1
PABY_01860
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pabi03021
]
PABY_01860
03019 Messenger RNA biogenesis [BR:
pabi03019
]
PABY_01860
Transcription machinery [BR:
pabi03021
]
Eukaryotic type
RNA polymerase II system
Other transcription-related factors
Transcription elongation factors
PABY_01860
RNA polymerase I system
PABY_01860
Messenger RNA biogenesis [BR:
pabi03019
]
Eukaryotic type
mRNA processing factors
3' end processing
DRB sensitivity inducing factor (DSIF) complex
PABY_01860
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Spt5-NGN
KOW
KOW2_Spt5
KOW4_SPT5
Ribosomal_uL24m-like
Motif
Other DBs
NCBI-ProteinID:
BES80619
LinkDB
All DBs
Position
complement(181896..182369)
Genome browser
AA seq
157 aa
AA seq
DB search
MEQRSPSIQPRLYAVRTVAGRELDVALIIEQRVKDENIPIFSVIVPSQIRGYVIVETPAA
FHAANAIQGIRYAKGVVPGILRYEDVERLLRPEAVVETLKPGDVVEIISGPFRGMKAQVV
RVQPGRNEVVLNVLEVEYPLQITVPGDSVRPARERGS
NT seq
474 nt
NT seq
+upstream
nt +downstream
nt
atggagcaacgctcaccctctatacagccacgtctatacgctgtaagaactgttgctggt
agagagctagacgtggctctcataatcgagcagcgggttaaagacgagaatataccaata
ttctctgtaatagtgccgtcacagatacgtggatatgtaatagttgagacccctgcagcg
tttcatgcagctaacgcgatacagggaataaggtacgctaaaggtgtagtgccaggcata
ctgcgctacgaggacgtggagagacttcttaggccagaggctgtagtcgagacgctcaag
cccggcgatgttgtggagataatatcggggcctttccgtgggatgaaggcgcaagttgta
cgagtgcagccgggtaggaatgaggtagttttaaatgtgctagaggttgagtaccccctt
caaatcacggtaccaggtgactcggtgaggcccgctagggagcgagggagctag
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