KEGG   Pyrodictium abyssi: PABY_02670
Entry
PABY_02670        CDS       T09712                                 
Name
(GenBank) DNA polymerase sliding clamp
  KO
K04802  proliferating cell nuclear antigen
Organism
pabi  Pyrodictium abyssi
Pathway
pabi03030  DNA replication
pabi03410  Base excision repair
pabi03420  Nucleotide excision repair
pabi03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:pabi00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    PABY_02670
   03410 Base excision repair
    PABY_02670
   03420 Nucleotide excision repair
    PABY_02670
   03430 Mismatch repair
    PABY_02670
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:pabi03032]
    PABY_02670
   03400 DNA repair and recombination proteins [BR:pabi03400]
    PABY_02670
DNA replication proteins [BR:pabi03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   Other elongation factors
    PABY_02670
DNA repair and recombination proteins [BR:pabi03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    Long Patch-BER factors
     PABY_02670
   MMR (mismatch excision repair)
    Other MMR factors
     PABY_02670
  TLS (translesion DNA synthesis) factors
   Other TLS factors
    PABY_02670
SSDB
Motif
Pfam: PCNA_N PCNA_C Rad1
Other DBs
NCBI-ProteinID: BES80700
UniProt: A0ABM8IV70
LinkDB
Position
complement(249315..250055)
AA seq 246 aa
MKMVFFDARVWRYLISAISKVIEEGVFIVDPDEGLTFRAMDPSHVIMLDMKFPRDSFEEF
DVEQRAELGVNLEDVAKVLRRAGKEDRLEISADENSISFTFIGKGYRRFTLPLLDITAEQ
LPEPQLEFKARVKVMSDVYRDTIKDVELIGDVIRFVASSEEFKVSSTSELGEAEIIYTRE
SGSLIELEAEDTQQASYTLEYFSDLSGASRVADMITIHFSTDMPALVEHELPQGARFSFL
IAPRVE
NT seq 741 nt   +upstreamnt  +downstreamnt
ttgaagatggtgttcttcgatgcacgtgtatggcgataccttatctcggcaatatccaag
gtcatagaggagggcgtgttcatagtcgaccccgatgagggtctaacgtttagggccatg
gacccctctcacgtgataatgcttgatatgaagtttccaagagactcctttgaggaattc
gacgtagagcagcgtgcagaactcggcgttaacctagaggatgtggctaaggtgctacgc
cgggccggcaaggaggatcgcctcgaaatatcagctgacgagaactcgatctcgttcacg
ttcataggtaagggctaccggaggttcacgctaccccttctcgatataactgctgagcag
ctcccagagccccagctcgagttcaaagcacgcgttaaggtgatgagtgacgtctaccgt
gacactataaaggatgttgagcttataggcgatgttatacggtttgtggcgagtagcgag
gagttcaaagtatcgtcgacaagcgagctaggcgaggcggagataatatatacacgtgaa
agcggcagcctcatagaattagaggctgaggacacacagcaggcaagctacacactcgaa
tacttcagcgacctatccggtgcctcgcgtgtagcagacatgataactatccacttcagt
acagacatgcctgcactcgtggagcacgagctgccgcagggggccagatttagcttcctc
atagcgccgagggtagagtag

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