Pyrodictium abyssi: PABY_03400
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Entry
PABY_03400 CDS
T09712
Symbol
endA
Name
(GenBank) tRNA-intron lyase
KO
K01170
tRNA-intron endonuclease, archaea type [EC:
4.6.1.16
]
Organism
pabi
Pyrodictium abyssi
Brite
KEGG Orthology (KO) [BR:
pabi00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
pabi03016
]
PABY_03400 (endA)
Enzymes [BR:
pabi01000
]
4. Lyases
4.6 Phosphorus-oxygen lyases
4.6.1 Phosphorus-oxygen lyases (only sub-subclass identified to date)
4.6.1.16 tRNA-intron lyase
PABY_03400 (endA)
Transfer RNA biogenesis [BR:
pabi03016
]
Prokaryotic type
tRNA spricing factors
tRNA splicing endonucleases
PABY_03400 (endA)
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GFIT
Motif
Pfam:
tRNA_int_endo
tRNA_int_endo_N
TSEN34_N
Motif
Other DBs
NCBI-ProteinID:
BES80773
UniProt:
A0ABN6ZT76
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Position
complement(313962..314510)
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AA seq
182 aa
AA seq
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MTFHGVLLGLRVIVFDPKEARELYRLGFYGKPLGIPKPRDAEFNAPLELGLVEAVYLAEK
GLLSVVDENGANITPDELAARARELIPRFDLIYKVYKELRDRGYIARSGLKYGADFAVYE
KGPGIDHAPYLIHVIEAGEEIDPLEIVRAGRLSHSVRKAFILAITGPGDAPTRYLMFKWS
KP
NT seq
549 nt
NT seq
+upstream
nt +downstream
nt
atgacgtttcacggcgtactactcggtttacgtgtcatagtctttgaccctaaagaggca
cgagagctgtacaggctaggcttctacggaaagccgcttggcatccccaagcccagagat
gcagagttcaacgctcctctcgaactcggcctcgtcgaggctgtctacctggcagagaag
gggctcttatcggtagtagacgagaacggcgccaatatcacgcccgacgagctagctgcc
cgtgcccgcgagctaataccaaggttcgaccttatatacaaggtgtacaaagagctacgt
gataggggctacattgcgcgctcggggctcaagtatggtgctgatttcgctgtctacgag
aagggtcctggtattgaccatgcaccctatctcatccacgtgatagaggctggcgaggag
atagacccgctggagattgtgcgggctggacgacttagccatagtgtccgcaaggccttc
atactggctataacggggcctggggacgctccgacaaggtacttgatgtttaagtggagt
aagccctaa
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integrated database retrieval system