KEGG   Pyrodictium abyssi: PABY_03400
Entry
PABY_03400        CDS       T09712                                 
Symbol
endA
Name
(GenBank) tRNA-intron lyase
  KO
K01170  tRNA-intron endonuclease, archaea type [EC:4.6.1.16]
Organism
pabi  Pyrodictium abyssi
Brite
KEGG Orthology (KO) [BR:pabi00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:pabi03016]
    PABY_03400 (endA)
Enzymes [BR:pabi01000]
 4. Lyases
  4.6  Phosphorus-oxygen lyases
   4.6.1  Phosphorus-oxygen lyases (only sub-subclass identified to date)
    4.6.1.16  tRNA-intron lyase
     PABY_03400 (endA)
Transfer RNA biogenesis [BR:pabi03016]
 Prokaryotic type
  tRNA spricing factors
   tRNA splicing endonucleases
    PABY_03400 (endA)
SSDB
Motif
Pfam: tRNA_int_endo tRNA_int_endo_N TSEN34_N
Other DBs
NCBI-ProteinID: BES80773
UniProt: A0ABN6ZT76
LinkDB
Position
complement(313962..314510)
AA seq 182 aa
MTFHGVLLGLRVIVFDPKEARELYRLGFYGKPLGIPKPRDAEFNAPLELGLVEAVYLAEK
GLLSVVDENGANITPDELAARARELIPRFDLIYKVYKELRDRGYIARSGLKYGADFAVYE
KGPGIDHAPYLIHVIEAGEEIDPLEIVRAGRLSHSVRKAFILAITGPGDAPTRYLMFKWS
KP
NT seq 549 nt   +upstreamnt  +downstreamnt
atgacgtttcacggcgtactactcggtttacgtgtcatagtctttgaccctaaagaggca
cgagagctgtacaggctaggcttctacggaaagccgcttggcatccccaagcccagagat
gcagagttcaacgctcctctcgaactcggcctcgtcgaggctgtctacctggcagagaag
gggctcttatcggtagtagacgagaacggcgccaatatcacgcccgacgagctagctgcc
cgtgcccgcgagctaataccaaggttcgaccttatatacaaggtgtacaaagagctacgt
gataggggctacattgcgcgctcggggctcaagtatggtgctgatttcgctgtctacgag
aagggtcctggtattgaccatgcaccctatctcatccacgtgatagaggctggcgaggag
atagacccgctggagattgtgcgggctggacgacttagccatagtgtccgcaaggccttc
atactggctataacggggcctggggacgctccgacaaggtacttgatgtttaagtggagt
aagccctaa

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