Pyrodictium abyssi: PABY_03610
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Entry
PABY_03610 CDS
T09712
Name
(GenBank) ATP-dependent DNA helicase
KO
K10844
DNA excision repair protein ERCC-2 [EC:
5.6.2.3
]
Organism
pabi
Pyrodictium abyssi
Pathway
pabi03022
Basal transcription factors
pabi03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
pabi00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
PABY_03610
09124 Replication and repair
03420 Nucleotide excision repair
PABY_03610
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
pabi03021
]
PABY_03610
03036 Chromosome and associated proteins [BR:
pabi03036
]
PABY_03610
03400 DNA repair and recombination proteins [BR:
pabi03400
]
PABY_03610
Enzymes [BR:
pabi01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
PABY_03610
Transcription machinery [BR:
pabi03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
PABY_03610
Chromosome and associated proteins [BR:
pabi03036
]
Eukaryotic type
Centrosome formation proteins
Spindle formation proteins
PABY_03610
DNA repair and recombination proteins [BR:
pabi03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
PABY_03610
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
ResIII
pEK499_p136
DUF7714
Motif
Other DBs
NCBI-ProteinID:
BES80794
LinkDB
All DBs
Position
331996..333855
Genome browser
AA seq
619 aa
AA seq
DB search
MEPGSSREFPYNEPRKGQLEAAKSIAETVRSGGVFILHAPTGFGKTSSIIHGLLQAGVDR
VLYVVRTKNEIQPVLRELKRFNLEGYSFLYSARRMCPLLAGENLSHEDFWDTCRLLRLRG
ECAYFTKLEELQASDVAEVLEHSGSMPQKAVKLLAAQGYCPFFALKLAATEASFIVATYP
YLFRPDIFQGTFEPLDYEDFVVVVDEAHSLLNITSLLEARITLEDLKNAAREIEEYELPE
DMARALELLGSEIARNKPGGRKLRRISREKLLKILGDHESWIDAAQEVRIAKMKERLEEG
QPVKLSVALARVARFAELLALEGTGVYTYSSNGRVGATVLPLEPCIVTRKPLNESKAVVL
ASGTLPASSMLRDMLCIEKPMRVYDVELLHGPVFPPQNQYTVVAAELTSRYTSRSRETYY
LYARYIIETYRNTARAVLVVYPSYEFMQKVLQQINSVARHEKVDMIVEDKSTNIEDVVEE
IRNGKTHVLINAVAGGKLTEGIEIVGDDNKSLVGTVFIAGVPYPQPDDYFQDQFNALQQR
LGETGARRLLFDYTAIVRTRQAIGRARRSAEDRAIVVLGDSRFMRRTLREYLRMRIDKVV
FNIEEYSSVIRSTAEAFNV
NT seq
1860 nt
NT seq
+upstream
nt +downstream
nt
atggagccgggcagcagtagagaattcccctacaatgagccgaggaagggccagctagaa
gcggcaaagagtatagccgagacagtacgcagcggaggagtattcatactccacgcgcca
acaggcttcggcaagacttccagcataatacatggcctactgcaagccggcgttgatagg
gtactgtacgttgtaaggactaagaacgagatacagccggtgctaagagaactaaaacgg
ttcaacttagaggggtatagcttcctctacagtgctaggcgtatgtgtccgctactagcc
ggagaaaatctaagccatgaagacttctgggacacgtgtagactcctacgcctccgaggc
gaatgcgcatacttcacgaagctcgaggagctacaggctagcgacgtcgccgaggtgctg
gagcactctggctctatgcctcagaaggccgttaaactgctggcggcacaagggtactgc
cccttcttcgcgctaaagctggctgctacagaggcatccttcatagtcgccacatacccc
tacctgttccggccagacatattccagggaacgttcgagccactagactacgaagacttc
gtagtagtggtagacgaggcgcactcactcctaaacataaccagcctgctagaagcgagg
ataacgctagaggatctgaagaacgccgctagggagatagaggagtacgagctcccagaa
gacatggcgcgagcgctcgagctgctcggctcggagatagcccggaataagccaggaggc
cggaagctacgccgtataagccgtgaaaagctgctcaaaatactcggggatcacgaaagc
tggatagacgctgcgcaggaggtacgcatagctaagatgaaagagaggctggaagagggc
cagccagtaaaactaagtgtagccctcgcccgggtagctaggttcgctgagctactcgca
ctagaggggaccggggtctacacctacagtagcaacggccgcgtcggagccacagtcttg
cccctagagccgtgcatcgttacacgtaagcccctcaacgagtctaaggcggtggtactc
gctagtggtacgctgccagcatcctctatgctaagggacatgctctgcatagagaagcct
atgcgtgtatacgacgttgaactgctccacggcccggtattcccgccacaaaaccagtac
acagtagtagccgccgagctcacgtcaagatacactagtagaagtcgcgagacatactat
ctctacgcacgctacattatagagacctaccggaatacagccagagcagtcctggtagta
taccctagctacgagtttatgcagaaagtactccaacagataaacagcgttgccaggcac
gagaaggtagacatgatagtagaggataagtccaccaatatagaggacgtggtggaggag
ataaggaacggcaagacgcatgtgttgataaacgctgttgccggcggaaagttgaccgaa
gggatagagatagtaggggacgataacaagagcctcgtagggaccgtgtttatagctggt
gtgccatacccacagcccgacgactacttccaggatcagttcaacgcgctgcaacagaga
ctaggagagaccggcgcgcgccggcttctgttcgactacaccgccatagtgagaacaagg
caagcaatcggcagagctaggcgcagcgcagaggaccgtgctatagttgttctcggtgac
agtcggttcatgcggaggactctgcgcgaatacctgagaatgaggatagataaggtagta
tttaatatagaagagtatagtagtgttatacgaagcaccgcagaagcctttaacgtttaa
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